Triticum dicoccoides (wild emmer wheat): 119349785
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Entry
119349785 CDS
T07278
Name
(RefSeq) structural maintenance of chromosomes protein 3-like
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdc03036
]
119349785
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tdc00535
]
119349785
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
119349785
Meiosis-specific proteins
Cohesin complex and associated proteins
119349785
Proteoglycans [BR:
tdc00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
119349785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
KASH_CCD
MscS_porin
AAA_29
Motif
Other DBs
NCBI-GeneID:
119349785
NCBI-ProteinID:
XP_037473768
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All DBs
Position
1B:complement(695607677..695619554)
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AA seq
1204 aa
AA seq
DB search
MYIKKVIIEGFKSYREETSTEPFSPKVNVVVGANGSGKSNFFHAIRFVLSDMFQNLRSED
RGALLHEGAGHSVVSAFVEIIFDNSDNRIPVDKEEVRLRRTVASKKDEYYLDGKHVSKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEDRRRESLKIMQ
ETANKRKQIDQVVHYLEERLRELDEEKEELKKYQQLDKQRRSLEYTILDHELNDARNELA
SMDDNRRQISERMSQADNEVVELRERVKSLEKEIKASTKGINETKSEKEDAEKKRTGALK
VVSQIELDLRDLKDRISSEKRAKDEAVRELNSMRKESEKSKSELAQISKVHAAKLKEEED
ISKSIMDREKRLSILYQKQGRATQFKNEAARDEWLRKEIHDLERVLLSNRKQESLLQEES
QKLKDEINKLTNHIESRRSESSKLEAVLADKQKHHNDFTKQKNALQDERKSFWKEENSVT
AEIDRLKEDLVKAQKSLDHATPGDIRRGLNSVSRIIRDHGIGGVFGPVLELVDCEEKFFT
AVEVTAGNSLFHVVVENDDISTKIIQVLTREKGGRVTFIPLNRVHAPNVNVPQSSDFVPL
LKKLKFRAEHRRAFEQVFGRTVICRDLETATRVARSNSLDCITLDGDQVAKKGGMTGGFY
DSRRSRLKFVKVIRDNKAEIEKKTAHLENVGKKLKDIDKKITDLITKHQQMDAERDHAKS
ELEQFKADIASATKQKGSLEKALAKKEKSLANIRNQIEQIQSGIAMKNDEMGTELIDQLT
LEERDLLSRLNPEITKLKEKFLSCKNSRIEIETRKEELENNLSTNLMRRQKELEAIISSA
DSKTLPVEVEAKEQELKESKRTLDEATTVLKANVDAINAHTRQMEQLKKQRDDLKALEAN
LEQTVQDGAKDLEQLMSSRSTYLVKQDECMKKIRDLGSLPADAFETYKRKNKKQLQKLLY
DCNEQLKQFSHVNQKALDQYVNFTEQREQLQRRRAELDAGDEKIRELISVLDQRKDESIE
RTFKGVARHFREVFSELVQGGHGYLVMMKKKDGDAGDDDMDEDVPREADPEGRIEKYIGV
KVKVSFTGKGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GSVVRRLADLADTQFIATTFRPEILKVADKIYGVTHKNRVSFINVVSKEQAMDFIEHDQT
ANAS
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaagaaggttataatcgaagggtttaaaagctacagggaggagacctcgaca
gaacctttcagccccaaagttaacgtagtcgttggtgcaaatggatctggcaaatcaaat
tttttccatgctatacgctttgtcctgagtgacatgtttcagaacctgcgcagtgaggac
aggggagctcttctccatgaaggtgctggacactcagttgtatctgcttttgtcgagata
atttttgataattcagacaaccgtattccagttgataaagaagaggtacgcttgcgaagg
acagttgcttcaaagaaggatgaatattacttggatggaaaacatgtcagtaaaactgaa
gtcatgaatctgctggagagcgctggtttctctcgatctaatccatactatgttgtccag
caaggaaagattgcatcccttactctaatgaaagattctgaacgactggatcttctcaaa
gagattggtggtactcgtgtttatgaagataggcgtcgggagagcttgaaaataatgcaa
gaaacagccaataaaaggaagcagattgatcaagttgtccactacctggaggagagactg
agggaacttgatgaagagaaggaggaactaaagaagtaccagcagctggataaacagaga
agatcacttgaatatactatattggaccatgaactaaatgatgctagaaatgaattagct
tcgatggatgataatcgaagacaaatttctgaaaggatgtctcaagcagacaatgaagtg
gtagagttacgtgagagggtcaaaagtttggagaaagaaataaaagcctctactaaaggg
ataaacgaaaccaagtctgaaaaggaagatgcagagaagaagcgtactggagcactaaag
gtagtttctcagattgaacttgatctgagagatttaaaagacagaatttcaagtgaaaaa
cgagcaaaggatgaagccgtaagggagttaaatagtatgaggaaagaaagtgaaaagtca
aagtctgaattggctcaaattagtaaggtgcatgcggccaaattgaaggaagaggaagat
atatcaaaaagtataatggaccgcgagaagcggctgagtatattgtaccaaaagcagggg
agggcaactcaatttaagaatgaggctgccagagatgagtggcttcggaaagaaattcat
gatcttgagcgtgtacttttatcaaatagaaagcaggaaagcttacttcaagaagaaagt
cagaagcttaaagacgaaattaataagttgacaaaccacattgaatctcggagaagtgaa
tcaagcaagttagaggctgttcttgcagacaagcaaaagcatcacaatgacttcacgaag
cagaaaaatgcacttcaagatgaaaggaaatcattttggaaggaggaaaatagtgtgaca
gctgaaatcgataggctaaaggaagatcttgtgaaggcacagaagagtttggaccatgca
acacctggggatatcaggagaggcctgaattctgttagcagaatcatcagggaccatggt
attggaggagtttttggtccagtgttagaactggttgactgcgaagagaagttttttaca
gctgttgaggtcactgctgggaatagcttgttccatgtggtggttgaaaatgacgatata
tcgacaaagataattcaggtattgactcgagaaaaaggtggacgggtgactttcatacca
ctgaatagagtgcacgctccgaacgtcaatgttccacagagctctgattttgttccactg
ttaaagaagttaaagtttcgtgctgagcatcgtcgtgcttttgaacaggtttttggtagg
acagttatatgccgagacctggaaactgcgaccagagttgcacgcagcaatagtctagat
tgcatcacacttgatggtgatcaagtagcgaaaaagggtggcatgacaggaggtttctat
gattctagacgctcaagactgaagtttgtaaaagtaatcagggacaacaaagcagaaatt
gaaaaaaagacggcacatctagagaacgtggggaaaaagttaaaagatatagataagaaa
attacggatttgattaccaaacatcagcaaatggacgctgaacgtgatcatgccaagtcg
gagttggaacagtttaaagctgatattgccagtgcaacgaagcaaaagggatcactggag
aaagcccttgcaaagaaggaaaaatcactcgcgaacatccgcaaccaaattgagcaaatc
caatctggcattgcaatgaaaaatgatgagatgggcacagaactgattgaccagctaact
ttagaagaaagagatctcctttcgcgactgaatcctgaaattacaaaattgaaggagaag
ttcctctcatgtaaaaacagtcgcattgagattgaaacaagaaaggaagaactggagaac
aatttgtcaactaatcttatgaggcgtcagaaagagttggaagcaataatttcatctgca
gattctaaaaccttgcctgttgaagtcgaagcaaaagagcaagaattgaaagagtctaag
aggactcttgatgaggcgacgacagtactgaaagctaatgtcgatgctattaatgcccat
acaagacagatggagcaactgaaaaaacaaagggatgatctgaaggctcttgaagctaat
ttggagcagacggtgcaagatggtgcgaaagacttggaacagttgatgagcagtaggagc
acgtatcttgtcaagcaagatgagtgtatgaagaaaatccgagatctgggctcattgcct
gctgatgctttcgaaacgtacaagagaaaaaacaagaagcagctacagaagctgctctat
gactgcaatgagcagttgaagcaatttagtcatgtcaaccaaaaggctcttgaccaatat
gtgaacttcactgaacagcgtgaacaactgcagagaagacgggctgaacttgatgctggt
gacgagaaaattagagagttgatatcagttttagaccaaaggaaggatgaatcaattgaa
cgcacatttaaaggagttgcaaggcacttccgcgaagtgttctctgaattagtgcaaggt
ggtcacggatacttggttatgatgaagaaaaaggatggtgatgctggcgatgatgacatg
gatgaggacgtgcctcgtgaagcagatcctgaagggaggatagagaagtatattggtgtg
aaagtcaaggtttccttcactggcaagggagaaactcagtccatgaagcagttgtctgga
gggcagaagacagtggtggcattaacactgatctttgctatccaacgatgtgatccagct
ccgttctacctgtttgatgagattgatgctgctctggatcctcagtacagaacggctgtc
gggagcgtggtccggcgtctggctgacctggcggacacccagttcatagccaccacattc
aggccggagatcctgaaggtggcggacaagatctacggcgtgacacacaagaacagggtg
agcttcatcaacgtggtgtccaaggagcaggccatggacttcattgagcacgaccagacg
gccaacgccagctga
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