Triticum dicoccoides (wild emmer wheat): 119349801
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Entry
119349801 CDS
T07278
Name
(RefSeq) RNA polymerase sigma factor sigC-like
KO
K03093
RNA polymerase sigma-I factor
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdc03021
]
119349801
Transcription machinery [BR:
tdc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
119349801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
119349801
NCBI-ProteinID:
XP_037473785
LinkDB
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Position
1B:697208022..697210895
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AA seq
569 aa
AA seq
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MGLPMARGPCCCSPSPSSSSSSSSSSPWMLQAHLPKHPHSPLGGRSVCSESLRVLALHLL
LNRRANLSRRRGEIVGTAVSSPGLLQITENKASSSPIIKVDAERTSLDGALDRNAQFNMS
AWMDVSHTSSNSLEYNLLMQNIHVLQSSLAAQDLVVLERDILVHIEQLGALKWFNASRSG
ATITHTSHETDFALPWNDTKFTPITPLEEQSDDQLVIIRSGKNQERKLKRIRASEKIPGV
CVKASSRKPRKSRRSTSSQFITEWKNYPGRRRSIVREQSELLVTIKECANLEKIRENMVK
EGQEVCYDKWAKAAGVDEAALKSRLQAGYCCRERLLVTTEWLVKYIARTYTGMGTAFEDL
LQAGKMGVLDGAERFDSRRGCKFSTYVKYWIRKPMLALLAENSGVIQLPARMDCIIRKVR
EAKRAIRSSTGRNPIDSEIATFVGASVANVRLARKCSRRVVSLYMEVGAGQNAKFVDVTP
DTSLEDPEEAIFRRQLRERLLLVLDRLPAREGRVLKLRHGLEDGRCRSLEQIGGIYHVSK
EWIRKIEKSAMLKLRNEDVHDELKDFCGF
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgcccatggcgcgcggcccgtgctgctgctcgccctcgccgtcgtcgtcctcc
tcctcctcctcctcctctccgtggatgctgcaggcccatctccccaagcacccccactct
ccactgggcgggaggtcagtttgctctgaatccctgagagttcttgccctgcatctcttg
ctcaatcggcgcgctaatcttagccggcgccggggtgagattgtcggaactgctgtgtct
tcacccggtttgcttcagataacagagaacaaggcaagcagctcaccaataataaaggtg
gatgcagaaagaacatcccttgatggtgctcttgacagaaatgcgcagttcaacatgtct
gcttggatggatgtatcgcacacaagtagcaacagtttggagtataacttattgatgcaa
aacatccacgtgttacagagtagtttggctgctcaagatttggtggtgcttgaaagagat
atccttgtacatattgaacagcttggagctctgaaatggtttaacgcgtcgaggtctggt
gccaccataacacatacctcacatgaaacagattttgcacttccttggaatgataccaaa
ttcactccgataactcctctcgaggagcaaagcgatgatcaattggtgattattcgaagc
gggaaaaaccaagagaggaaactgaagagaattagagcgtcagaaaagatccccggggtt
tgtgtaaaagcatcctcacgaaaaccaagaaaatcacgcaggtccactagtagtcaattt
ataactgagtggaaaaactatccaggccggcgaaggagcatagttcgggaacagtcggag
ttgctggtgactatcaaggaatgtgcaaaccttgagaagatcagggaaaacatggtgaag
gaagggcaggaggtctgctatgataagtgggccaaagcagctggagttgatgaagcggcc
ctgaagagtagactgcaagccggatactgctgcagagagaggttactggtgaccaccgag
tggcttgtcaaatacattgcaaggacatacaccggaatggggacagctttcgaggatcta
ctccaggctgggaaaatgggtgtccttgatggcgctgagaggttcgacagccggagagga
tgcaaattctcaacctatgtgaagtactggataaggaaacccatgctagcgctcctcgct
gaaaattctggagtgatccagctgcccgcaaggatggattgtatcatccgaaaggtcagg
gaagctaagcgggcaattcgatccagcactgggcggaatccaatagactcggagatcgcg
accttcgttggcgcgtcggttgccaatgttagattggctcggaagtgctcccgtcgtgtc
gtttcactctacatggaggtcggggccggacagaacgccaagttcgtggacgtgacccca
gacacatcactagaagacccagaggaggccatcttccggaggcagctgagggagaggctt
ctcctggtcctggacaggctcccggcgagggaagggcgcgtgctgaagctgcgacacggc
ctcgaggatggcaggtgccggtccctggagcagatcggaggcatctaccacgtgtccaag
gaatggatcaggaagatcgaaaagtcagctatgttgaagctcaggaacgaggacgtgcat
gatgagctgaaggacttctgtggattctag
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