Triticum dicoccoides (wild emmer wheat): 119349866
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Entry
119349866 CDS
T07278
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 15-like isoform X1
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03013
Nucleocytoplasmic transport
tdc03015
mRNA surveillance pathway
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119349866
09122 Translation
03013 Nucleocytoplasmic transport
119349866
03015 mRNA surveillance pathway
119349866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119349866
03041 Spliceosome [BR:
tdc03041
]
119349866
Enzymes [BR:
tdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119349866
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119349866
Spliceosome [BR:
tdc03041
]
Complex C
Other components
EJC/TREX
119349866
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119349866
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
DNA_repr_REX1B
Motif
Other DBs
NCBI-GeneID:
119349866
NCBI-ProteinID:
XP_037473857
LinkDB
All DBs
Position
1B:708744523..708748926
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AA seq
431 aa
AA seq
DB search
MMGEAKENDVYEEELLDYEEDDDKALDASSAKPAADAAQAKKGYVGIHSSGFRDFLLKPE
LLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPTAGQVA
ALVLCHTRELAYQICNEFERFSKFLPELKVAVFYGGVHIKKHQDLLKNDCPHIVVGTPGR
ILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEI
RPICKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLTESEKNRKLNDLLDALDFNQVVIFVK
SVSRAAELNKLLCECNFPSICIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIER
VNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELP
EQIDTSTYMPS
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgatgggagaggccaaggagaacgacgtgtacgaggaggagctgctcgactacgaggag
gacgacgacaaggccctcgacgcctcctccgccaagcccgccgccgacgccgcccaggcc
aagaagggctacgtcggcatccacagctccggattccgcgacttcctcctcaagcccgag
ctgctccgggccatccaggactgcggattcgagcacccctccgaagtgcaacatgagtgc
atccctcaagcaatcctcggaatggatgtcatctgccaagcaaaatctgggatggggaag
actgctgtctttgtcctgtcgtctctccagcagatcgatcctactgctggtcaggtggca
gcgctcgtattgtgccacaccagagagctggcttaccagatttgcaacgagttcgagagg
ttcagcaaatttctgcctgaattaaaggttgctgtattctatggaggtgttcacatcaag
aaacatcaggatttgctcaagaacgactgcccccacattgttgtgggcacacctgggagg
attctagctctagctagagacaaggacctctctttgaagaatgtgaggcatttcattctt
gacgagtgtgacaagatgcttgagtcactggacatgcggagggatgtccaggagattttc
aagatgacacctcatgataagcaggtcatgatgttttcggcaactctcagcaaggagatc
cgtcccatttgcaagaaatttatgcaagatcctatggaaatttatgttgatgatgaggca
aagttgacccttcacggtcttgttcagcactacataaaattgactgagtcagagaagaac
cgaaaattgaacgatctcttggatgctctcgatttcaaccaagttgtgatatttgtgaag
agcgttagcagggctgcagagctgaacaagttgctttgtgaatgcaacttcccttcaatc
tgcatccattctggcatgacccaggaagagaggctgacccgatacaagaacttcaaggaa
gggcacaagaggattcttgtggcgacggatttggttggcagagggatcgacattgagcgt
gtcaacattgtgataaactatgacatgcctgattcagctgatacctacttgcacagggtt
ggaagggctgggcgttttggcaccaaggggcttgccataacttttgtttcgtcggcctcg
gactcggacgtccttaaccaggtgcaagaacggtttgaggtggacatcaaggagctgcct
gagcagattgacacttcaacatacatgccgtcgtag
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