Triticum dicoccoides (wild emmer wheat): 119349885
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Entry
119349885 CDS
T07278
Name
(RefSeq) structural maintenance of chromosomes protein 5-like
KO
K22803
structural maintenance of chromosomes protein 5
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119349885
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
119349885
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
AAA_29
AAA_16
AAA_25
NACHT
ABC_tran
AAA_27
Diphtheria_T
Motif
Other DBs
NCBI-GeneID:
119349885
NCBI-ProteinID:
XP_037473879
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Position
1B:complement(710437619..710447981)
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AA seq
1067 aa
AA seq
DB search
MAPARAAKRPKLERPAASASASTSAAPHQRGDDDYVPGNIVEIELCNFMTYDRLVCRPGP
RLNLVVGPNGSGKSSLVCAIALALAADPAILGRAASVRAFVKRGEESGHVRLSLRSEDQG
RDIDITRKIDTNNKSEWLLDGATVPKKDIIDVIKKFNIQINNLTQFLPQDRVCEFAKLTP
IQLLEETEKAVGDPNLPVQHRQLIEWSKELRNLEVAVKQKEQTLNNLKALNAEQEKDVQR
VRQRDKLLKKAELMKKKLPWLKYDAKKEQFQKVQDEEKIFKKKMDDAAKIWQDAKAPIEG
LKKEKTTITSSMKKITNQINQNTNKRREVTDDEIQLSARLKTTLDDIEYLKRHEKNLQQK
ISKAKEGLAAAEREFQDLQPYEPPRDEMTQLTNDIGHKICGINDLKLKRKEKEWQLSQER
ENLRKCSDRLMQMESKNNKLLQALQRAGAERINEAYSWVQNNKNMFRGEVYGPVLLEVNV
QSKTHAGYLESHVPNYIWRSFITQNASDRDLLVRQLKQYGTPILNYTGANSIMGEPLNIT
PEMKQLGITSRLDQEFDAPPAVKNVLITQASVDQSYIGTNQADQSADDVVKLGINDLWTP
RNHYRWTRSRYGGHLSANVDSIYPSRLFMCDVNVSDIEMLRSEKDEHTRNVEGMEEALKE
LQKEQRKLEDEEAEFRKKKEAITDRVRLEKKKREDIQRRIDLKRRTLEDISKEEDVESST
RKLTDKLAKLNDDRFRALLKLKNLLVEAVALKWSYTEKNMASIELDTKIWEMEKDVKKHE
KDVLSASRDYENCKRITQEHKQLVLKAKQHAESVSMITDNLAKEFEKMPTTIEELELAIQ
DTESEANSMLFLNQNVLQEYQNRQREIESISTKLEDDKAECERCCSEIETTKGKWLPTLR
SLVLKINDTFSRNFQEMAVAGEVSLDEHGLDFSQYGILIKVKFRQTGELQVLSAHHQSGG
ERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPVNERKMFQQLVRAASQLNTPQCFLLTP
KLLPDLEYSDACSILNIMNGPWIEKPAHAWRAGDSWRTVIGLGLAGN
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccgcccgggccgccaagcgccccaagctggagcgccccgccgcctccgcctcc
gcctccacctccgccgcgccccatcagcggggcgacgacgactacgtgccgggcaacatc
gtggagatcgagctgtgcaacttcatgacctacgaccgcctcgtctgccgccccggcccg
cgcctcaacctcgtcgtcggccccaacggctccggcaagagctccctcgtctgcgccatc
gcgctcgccctcgccgccgaccccgccatcctcggccgggccgccagcgtcagggccttc
gtcaagcgaggggaggagtccggccacgtccgcctctccctccgctccgaggaccagggc
cgcgacatcgacatcacccgcaagatcgacaccaacaacaagtccgagtggctactcgac
ggtgccaccgtccccaagaaggatatcatcgacgtcatcaagaagttcaacatccaaatc
aacaacctcactcagttcttgccccaagatcgtgtgtgcgagtttgcaaagctcaccccc
atccagctgctagaagagaccgagaaggccgtgggcgatcccaatttacctgttcagcat
cgccagcttatagaatggagcaaggagctcaggaatcttgaagtggccgtaaagcaaaag
gagcagaccttgaacaacctcaaggccctcaacgccgaacaagaaaaagatgtccaacgt
gtccgccaaagagataagctcctcaagaaggctgagctaatgaagaagaagttgccctgg
ctcaaatacgacgcgaagaaggagcaattccagaaggtacaggatgaggagaaaattttc
aagaagaaaatggatgatgcagccaagatctggcaagatgcaaaagcccctatcgaaggg
ctcaagaaagagaaaacgacaattacttcaagtatgaagaagataaccaaccaaataaat
caaaacacaaacaagcgtcgggaagttacagacgacgagattcagctgagtgcacgattg
aaaaccacgcttgatgacatagaatatctgaaaaggcatgaaaagaatctgcaacaaaag
atctcaaaggctaaggaaggtcttgctgctgctgaaagggaatttcaagatctacaacca
tatgaaccacctagagatgaaatgacacaactaacaaatgatattggacataaaatttgt
ggcataaacgatctaaaacttaaacggaaagagaaggagtggcagttatcacaagagaga
gaaaatcttaggaagtgttccgacaggttgatgcaaatggaaagtaagaacaataagtta
ctccaagcattgcaaagagctggtgctgaaagaatcaatgaagcatactcttgggtgcag
aacaacaaaaatatgttcaggggagaagtttatgggcctgttctgcttgaggtcaatgtt
cagagtaaaactcacgctggttacttggaaagccatgttccgaactatatatggaggtca
ttcattacacagaatgcttccgaccgtgacctcttggttagacaactgaagcaatatggt
actcctattctcaactacacaggggccaatagcatcatgggtgagccattgaacattacc
ccagagatgaagcaacttgggatcacatcaagactcgatcaagaatttgatgctcctcct
gctgtaaaaaatgttttgattactcaggcttcagtggatcaatcgtatataggtacaaat
caagcggatcaaagcgcagatgatgtggtaaagttaggtattaatgacctttggactcca
cgtaaccattatcgatggaccagatcaagatatggtggccatttgtcagcaaatgtagat
tcaatctacccgtcgcgcctcttcatgtgcgacgtgaatgttagtgacattgaaatgctt
cgatctgagaaggatgaacatacaagaaatgttgagggcatggaggaagccttaaaagag
ctccagaaagagcagagaaaattagaagatgaagaggcagaattccgcaagaaaaaggaa
gcgattactgacagggtgaggcttgaaaagaagaagcgagaagacatacaaaggcgtatc
gatttgaaaagaagaactctggaggacatatcaaaagaggaagatgtggagtccagcaca
agaaagcttactgataagctagctaagttaaatgatgatcgatttcgagcattgctaaaa
ctcaagaatttacttgttgaagctgttgctctcaaatggagttatacagaaaagaacatg
gcttctattgagcttgatacaaagatatgggagatggaaaaggatgtgaagaaacacgaa
aaggatgttcttagtgcttccagagactatgaaaactgtaaaagaatcactcaagagcat
aagcagctggtgcttaaggcaaaacagcatgcggagtcagtatctatgatcacggacaac
cttgcaaaagagtttgagaagatgccgaccaccatagaggaattggaacttgcaatacaa
gatactgaatcagaagcaaattctatgctattcctcaaccaaaatgttttgcaggagtat
caaaaccggcaacgtgagattgaatcaatatcaacaaaactggaagatgataaagcagaa
tgtgagaggtgctgctctgaaatagaaactacaaagggtaaatggcttccaactctccga
agtcttgttttaaaaataaatgatacctttagtcgcaacttccaagaaatggctgttgct
ggagaagtttcacttgatgagcatggtcttgattttagtcaatacggtattcttataaag
gtgaagtttaggcaaactggtgagctgcaggtgctaagtgctcatcaccaatctggaggg
gagcggtcagtttccacgatcctgtatcttgtatcgctccaagacctgaccaactgccca
tttagggtggttgatgagataaaccaaggaatggatccggtaaacgagaggaagatgttc
cagcagcttgtgagggcggcgagccaactcaacacaccacagtgcttcctgctgacaccc
aagttgctgcctgatttggaatatagcgacgcgtgcagcatcttgaacatcatgaacggt
ccctggattgagaaaccagcccatgcttggcgcgcgggagatagttggagaacggtcatt
ggcctggggctggctgggaactga
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