Triticum dicoccoides (wild emmer wheat): 119352015
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Entry
119352015 CDS
T07278
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00040
Pentose and glucuronate interconversions
tdc01100
Metabolic pathways
Module
tdc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119352015
Enzymes [BR:
tdc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
119352015
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
119352015
NCBI-ProteinID:
XP_037474665
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Position
2A:complement(716013627..716015399)
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AA seq
401 aa
AA seq
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MEPRPRPLAVAVNALLCVLSLCVSAAEAENVTTYDAKNFGAKGNGVDDDTKALVAAWKKA
CGTPGTVTLVIPPGTYYIGPAHFHGPCEALAITFLLQGVLMAATDLKRFGNDWIEFGWVT
NLTVVGQNGGVIDGQGAASWPFNKCPVRKDCKVLPTSVMFLNNQNTVVRDITSVNSKFFH
IALLHNNNMRMSNLRIHAPENSPNTDGIHIERNTGVIISDSRIGTGDDCISIGQGNHNIY
IARVHCGPGHGMSVGSLGRYVGEGDVTSIHVTDMTFHGTMNGVRIKTWENSPTKSLAARM
LFENMVMKDVQTPIIIDQKYCPYYNCEHRYVSGVTLEDIKFKNIKGTSTLPVAVLLRCGV
PCHGVVLQNVDLIYNGQAGTLSHCENANATYVGYQHPKPCV
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggagccgcggccgcgcccgctggccgtcgccgtcaacgcgctgctctgcgtcctctct
ctctgcgtgtccgcggccgaggccgagaacgtgaccacctacgacgccaagaacttcggc
gctaaaggcaacggggtcgacgacgataccaaggcgctggtggcggcatggaagaaagcg
tgcgggacgcctggcacggtgacgctggtgatcccgccggggacctactacatcgggccc
gcgcatttccacggcccctgcgaggccctcgccatcaccttcttgctccagggggtgctc
atggcggcaacggatctgaagcgttttggcaatgactggattgagttcgggtgggtgaca
aacctcaccgtggtcggccagaacggcggcgtcatcgacggccagggcgccgcctcctgg
ccatttaacaagtgtcccgtccgaaaggattgcaaagtccttcccaccagtgtgatgttc
ttgaacaaccagaacacggtggtgcgcgacatcacctcggtgaacagcaagttcttccac
atcgcgctgctgcacaacaacaacatgaggatgagcaacctccggatccatgcgcccgag
aacagccctaacacggacggcatccacatcgagcggaacaccggcgtgatcatctccgac
tcccgcatcggcaccggcgacgactgcatctccatcggccaggggaaccacaatatatac
atcgcccgtgtccactgcggcccaggccacggcatgagcgttggtagcctcggccgctac
gtcggtgagggcgacgtcactagcatccacgtcaccgacatgaccttccatggcaccatg
aacggcgtccgcatcaagacgtgggagaactcccctaccaaaagcctcgccgcgcgcatg
ctgttcgagaacatggtgatgaaggacgtgcagacccccatcatcatcgaccaaaagtac
tgcccttactacaactgcgagcacaggtacgtctccggggtcaccctcgaggacattaag
ttcaagaacatcaagggcacgtcgacattgcccgtggccgtgctgctccggtgcggcgtg
ccgtgccacggcgtcgtgctgcagaacgtcgacctcatctacaacggacaggcaggcacc
ttgtcacactgcgagaacgccaatgccacctacgttggctaccagcacccaaagccatgc
gtctag
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