KEGG   Triticum dicoccoides (wild emmer wheat): 119352964
Entry
119352964         CDS       T07278                                 
Name
(RefSeq) THO complex subunit 4D-like
  KO
K12881  THO complex subunit 4
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03013  Nucleocytoplasmic transport
tdc03015  mRNA surveillance pathway
tdc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119352964
  09122 Translation
   03013 Nucleocytoplasmic transport
    119352964
   03015 mRNA surveillance pathway
    119352964
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tdc03019]
    119352964
   03041 Spliceosome [BR:tdc03041]
    119352964
Messenger RNA biogenesis [BR:tdc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     119352964
    TREX complex
     119352964
Spliceosome [BR:tdc03041]
 Complex C
  Other components
   EJC/TREX
    119352964
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    119352964
SSDB
Motif
Pfam: RRM_1 RRM_3 FoP_duplication
Other DBs
NCBI-GeneID: 119352964
NCBI-ProteinID: XP_037475444
LinkDB
Position
2A:34076438..34082130
AA seq 278 aa
MSFYARRGGDRGSERFQGGGRGGYAMRGRSGFPPRGPLGINARPSARIIAKSFSRTKDMT
WRPDLFSDSMAASGIETGTKLYISNLDYRVSNEDIKELFSEVGHLKRFAVHFDGYGRQNG
TAEVVFTRRSDAIAALKRYNNVLLDGKSMKIEVIGSDLGLSMTPRINVVGASNGRATRTV
VMTPETGRRGGGSSTRPLSNPTTRLNRGAFQAGRGAFQAGRGGGRGYAPSQAQFQGRGRG
RGQFRGRGRGRGRKGAEKSADDLDKDLESYHAEAMKTD
NT seq 837 nt   +upstreamnt  +downstreamnt
atgtcattttatgcaagaagaggtggagataggggtagtgagcgttttcaaggaggagga
cgaggtggatatgccatgcgtgggagatcagggtttcctcctcgaggaccacttgggatt
aacgctcgaccatctgcacgcattattgctaagtcttttagcagaaccaaagacatgacc
tggagacctgatctatttagtgatagtatggcggctagtggaatcgaaactggtacaaaa
ttgtacatttcaaacttggactatcgtgtttccaatgaggatataaaggagctgttttca
gaagttggtcatttgaaacgctttgctgttcactttgatggttatggtcgccaaaatggc
acagcggaggtggtatttacaaggaggagtgatgcaattgctgcattgaaacgttataat
aatgttctgcttgatggaaaatctatgaagattgaggtcattggaagtgacctgggtttg
tctatgacacctcgtataaatgttgtcggggcatctaatggtagagctacgagaacggtt
gttatgacgcctgaaacgggtcggcgtggtggtggttccagcactaggcctttgagtaat
cctaccaccaggttgaatcgtggtgcattccaagctggacgtggtgctttccaagcggga
cgaggcggaggcaggggctatgctccgtcacaggctcagttccagggccgaggcaggggc
cgcggtcagttccggggccggggccgcggtcggggcaggaagggggcagagaaaagcgca
gatgacctggacaaagacctggaatcctatcatgcggaggcaatgaagaccgactga

DBGET integrated database retrieval system