Triticum dicoccoides (wild emmer wheat): 119352964
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Entry
119352964 CDS
T07278
Name
(RefSeq) THO complex subunit 4D-like
KO
K12881
THO complex subunit 4
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03013
Nucleocytoplasmic transport
tdc03015
mRNA surveillance pathway
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119352964
09122 Translation
03013 Nucleocytoplasmic transport
119352964
03015 mRNA surveillance pathway
119352964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119352964
03041 Spliceosome [BR:
tdc03041
]
119352964
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119352964
TREX complex
119352964
Spliceosome [BR:
tdc03041
]
Complex C
Other components
EJC/TREX
119352964
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119352964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
119352964
NCBI-ProteinID:
XP_037475444
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All DBs
Position
2A:34076438..34082130
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AA seq
278 aa
AA seq
DB search
MSFYARRGGDRGSERFQGGGRGGYAMRGRSGFPPRGPLGINARPSARIIAKSFSRTKDMT
WRPDLFSDSMAASGIETGTKLYISNLDYRVSNEDIKELFSEVGHLKRFAVHFDGYGRQNG
TAEVVFTRRSDAIAALKRYNNVLLDGKSMKIEVIGSDLGLSMTPRINVVGASNGRATRTV
VMTPETGRRGGGSSTRPLSNPTTRLNRGAFQAGRGAFQAGRGGGRGYAPSQAQFQGRGRG
RGQFRGRGRGRGRKGAEKSADDLDKDLESYHAEAMKTD
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtcattttatgcaagaagaggtggagataggggtagtgagcgttttcaaggaggagga
cgaggtggatatgccatgcgtgggagatcagggtttcctcctcgaggaccacttgggatt
aacgctcgaccatctgcacgcattattgctaagtcttttagcagaaccaaagacatgacc
tggagacctgatctatttagtgatagtatggcggctagtggaatcgaaactggtacaaaa
ttgtacatttcaaacttggactatcgtgtttccaatgaggatataaaggagctgttttca
gaagttggtcatttgaaacgctttgctgttcactttgatggttatggtcgccaaaatggc
acagcggaggtggtatttacaaggaggagtgatgcaattgctgcattgaaacgttataat
aatgttctgcttgatggaaaatctatgaagattgaggtcattggaagtgacctgggtttg
tctatgacacctcgtataaatgttgtcggggcatctaatggtagagctacgagaacggtt
gttatgacgcctgaaacgggtcggcgtggtggtggttccagcactaggcctttgagtaat
cctaccaccaggttgaatcgtggtgcattccaagctggacgtggtgctttccaagcggga
cgaggcggaggcaggggctatgctccgtcacaggctcagttccagggccgaggcaggggc
cgcggtcagttccggggccggggccgcggtcggggcaggaagggggcagagaaaagcgca
gatgacctggacaaagacctggaatcctatcatgcggaggcaatgaagaccgactga
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integrated database retrieval system