Triticum dicoccoides (wild emmer wheat): 119353197
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Entry
119353197 CDS
T07278
Name
(RefSeq) nuclear poly(A) polymerase 3-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119353197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119353197
Enzymes [BR:
tdc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
119353197
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
119353197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
MTPAP-like_central
NTP_transf_2
PAP_RNA-bind
Motif
Other DBs
NCBI-GeneID:
119353197
NCBI-ProteinID:
XP_037475686
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Position
2A:complement(57626044..57632284)
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AA seq
532 aa
AA seq
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MAAYCPLPAMAPELPVWTHAAPAPPEPEPLXXXXXXXPPPPPLPAGRRLLPWPVPHRPPP
DFFFEMDYRRTHSLVQFLADEGAIPTPEEEETREQVIRELKKIVTDWAKAVACEERVPPR
RVTATVLTYGSYTLGAHGPESDIDALCVGPCIANLPHHFFAVLRQILKCRPEVSGLQTVE
NAKVPLMRFRFSGISVDLTYAQLPVLDAVQAINTSSPQYLRKLDSRSWKSLSGVRVNEQI
VQLVPDQEKFQVLLRCIKLWARRRGLHCHLLGFFAGIHLAILAAYVCQRFPNATANGLFT
MFFEIFAHWPWHIPVDLHGQQTNCTRSDGCLMPIVMPCSPPELCASNMTEGTFRKIREEL
MRGYVLTKDLGSHDFEWAWIFEPFPYSTTYEQFLRIALCAPTSEELHDWTGWVKSRFPYL
ILKLEDNGIECDPNSSQEVDHTVIKPNIVYHWGLIPQSDTLLDSSSLKEDFMKYVINDVY
GKVKCTNSELTLSIVGASELPKSMYNDSFYSRHLHQYGVGYQAADDCWSTIG
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctactgcccgctgccggcgatggcgccggagctcccggtctggacccacgcc
gccccggcgccccccgagcccgaacccctnnnnnnnnnnnnnnnnnnnnngcccccaccg
cccccgctccccgcgggccgccgcctcctcccctggccggtcccccaccggccgcctccc
gacttcttcttcgagatggactaccgccggacccactccctcgtgcagttcttggcggac
gagggggccatcccgacgcccgaggaggaggagacgagggagcaggtcatccgcgagctc
aagaagattgtgacggattgggccaaggcggtggcctgtgaggagagggttcccccgagg
cgggtgacggctacggtcctcacctatggttcttacacgttaggggctcacggacctgaa
tctgacatcgatgcgctatgtgttggtccctgtatcgcaaacttgccgcaccactttttt
gctgttctgcgacaaattctcaagtgcaggccggaagtatcaggactgcagactgtggaa
aatgccaaggttccattgatgcgatttagattcagtgggatttctgttgatctgacatat
gcccagctcccagtccttgatgcagttcaggctataaatacatctagtcctcagtatctt
cggaaacttgattcacggagttggaagagtttgtctggagttcgtgttaatgagcagatt
gtgcagctagtgccggatcaagagaagttccaagttctgttgcgatgcataaaactatgg
gctaggaggcggggacttcattgccatttgcttggtttctttgctgggattcatttggcg
attcttgcagcatatgtttgtcagagatttccaaatgccactgccaatggtctgttcacc
atgttctttgagatatttgctcactggccttggcatattccagtagatctgcatggtcag
caaactaactgcacgcgctcagatgggtgtttaatgcccatagtgatgccttgttctccg
ccggagctctgtgcgtctaatatgacggaaggtaccttcaggaagatcagagaggagctt
atgcgtggttatgttttgaccaaggacctagggagccatgattttgagtgggcatggatt
tttgaacccttcccatattcgacaacatatgaacaatttcttcgcattgctctatgtgct
ccaacttctgaagaactgcatgattggactggatgggttaaatcccgcttcccttacctt
attctcaagctggaagataacggcattgagtgtgaccccaattcatcacaggaagttgat
catacagtcatcaaacccaacattgtatatcactggggcctcatccctcaatcagatact
cttcttgattctagctctctgaaggaagatttcatgaaatatgtcatcaatgatgtctat
ggaaaggtgaaatgtacaaactcagagctgacgttgtccatcgttggcgcatcagagctg
ccaaaaagcatgtacaatgactcattttactctcggcacctgcaccagtatggggtgggc
taccaggcagcagatgactgttggagtacaattggctag
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