KEGG   Triticum dicoccoides (wild emmer wheat): 119353500
Entry
119353500         CDS       T07278                                 
Name
(RefSeq) protein transport protein SEC31 homolog B-like isoform X1
  KO
K14005  protein transport protein SEC31
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    119353500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tdc04131]
    119353500
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tdc02044]
    119353500
Membrane trafficking [BR:tdc04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    119353500
Secretion system [BR:tdc02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   119353500
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_RIG_2nd WD40 Beta-prop_EIPR1 TPR_Sec16 Beta-prop_EML Beta-prop_WDR90_POC16_2nd TPR_GEMI5 Beta-prop_HPS5 WDR55 ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N EIF3I MIOS_WD40 SRA1 Beta-prop_SCAP PEP5_VPS11_N Beta-prop_WDR19_1st Prp18 Sec16
Other DBs
NCBI-GeneID: 119353500
NCBI-ProteinID: XP_037476018
LinkDB
Position
2A:complement(88342769..88354845)
AA seq 1135 aa
MACIKSAQRAALTALAPEAPYLAAGTMSGAVDMQFSASANIEIFSLDFQSDSPDLPLLAA
APSPDRFNRLCWSRPGAADGDSFSLGLLAGGLSDGSVAVWNPLSMISSEGQAEDVMVAQL
EKHNGAVTGLEFSELTPNRLASGGNEGDICIWDLKNPCEPNVFPPLKNVGSNAQAEISCL
TWNPKFQHILASASSNGITVVWDLRTQKPLTSFSDSNRRNCSVLQWNPDMSTQLILASDD
DNSPSLRVWDVRKTIAPVREFVGHSKGVIGMSWCPYDSSFLLTCAKDNRTICWDTVSGEI
INELPTSSNGNFDIHWYRKIPGVVAASSYDGKIGVHNLEFSSLYAAGDSTVGASARPRAA
APKWLKCPTGASFGFGGKLVSFHPAQGTQAGTSEVHVHNLVIEQSLVSRSTEFEAAMQNR
DKSALRALCDQKSQESLSEEEKETWSFLRVMFEDGDTARTKLLVHLGFNPPQEPTVNATD
ELSKALADTLNIDHGTDNMDAQFLADNGDDFFNNPQPSETSLAEEPMSTNVQEIEQEMPE
NIVPSDPSIDKSIQHALVVGDYKGAVNQCLAANRMADALVIAHAGGSALWESTRNQYLKN
SISPYLKVVSAMVGNDLMSFVSTWPLNAWKETLALLCTFAGKEEWNVLCDTLASRLLSAG
DMLAATLCYICAGNIDKAVEIWSRNLSSEDGGKTYVDLLQDLMEKTITLALATGHKRFSA
SLSKLVENYAELLASQGLLKTAMEYLKLMGADENSDELTILRDRIAFSTEENDATRSSVP
ESSANSSSYLPNQQSYTPDPSQNLYQVPQQYNNVQSYPEVYPQPPNSRANVPSNTYPEVY
PQSHNAAYSGYAGYQPQHQTQMFVPQNTPVDTQPSPAPFPVPHQTVKTFTPANVPSLKNP
EQYHQVSTLGSQLYTPPANSSYAPGPPAQFQSGPPTTFHQPAPPAQYQTVPPVPSVPGTN
PNQMFTPAVPTNSASRFIPSTNQGFVQRPGLSPAQPSSPTQAQPPAQPTVAPPAPPPTVQ
TADTSNVSAELRPVIATLTRLFDETSKALGGAPAKKREIEDNSKKIGALFAKLNTGDISP
NVSSKLIQMCSALDSSDFATAMQLQILLTTSDWDECNFWLSSLKRMIKTRQSFRV
NT seq 3408 nt   +upstreamnt  +downstreamnt
atggcgtgcatcaagagcgcgcagcgcgcggcgctgacggcgctcgcgccggaggcgccc
tacctcgccgccggcaccatgagcggcgccgtcgacatgcaattctccgcgtcggccaac
atcgagatcttcagcctcgacttccagtccgactcccccgacctgcccctcctcgccgcg
gccccctcccccgaccgcttcaaccgcctctgctggtcccgcccgggcgccgccgacggc
gactccttctccctcggcctcctcgccggcggcctcagcgacggctccgtcgccgtctgg
aacccgctcagcatgatcagctccgaggggcaagcggaggacgtcatggtcgcgcagctc
gagaagcacaacggggcggtcactggattggagtttagcgagctcacacccaatcggctc
gcttcagggggtaacgagggggacatttgcatctgggatctcaaaaacccctgcgagcca
aacgtcttcccgccactgaagaatgttggttcgaatgctcaagctgaaatatcttgctta
acctggaatcccaagtttcagcatatactagcatcagcttctagtaacgggattacagta
gtttgggatttgagaacccagaaaccattaactagcttttcagattcaaatagaaggaac
tgttctgttctccagtggaatccagacatgtccacccagctaattcttgcatcagatgac
gacaactctccttctttgagagtatgggatgtgaggaaaaccattgcacctgtacgggaa
tttgtgggacactcaaaaggtgtaattggtatgtcatggtgcccctatgacagttcattc
ttgcttacttgtgctaaagacaatagaacaatatgctgggatacagttagtggagagatt
atcaatgagctaccaacaagctctaatggtaactttgacattcactggtaccggaaaatt
ccaggtgttgtagcagcatcttcatatgatgggaagatcggtgtacacaacttggagttc
tccagcctgtatgcagctggtgacagcactgttggtgcctcagcgcgtccaagagctgca
gctccaaaatggttgaaatgccccacgggtgcatcttttggctttggtggcaaacttgtt
tccttccatccagcccaaggcacacaagcgggtacttctgaggtgcatgtgcataatttg
gtgattgagcagagtctagtaagccggtcaactgaatttgaagctgctatgcagaatagg
gacaaaagtgcactgcgtgctttgtgtgaccaaaaatcacaagaatctttatccgaggag
gagaaagaaacatggagcttcttaagggttatgttcgaggatggggatactgccagaaca
aaattgcttgttcatcttggattcaatccacctcaagaaccgactgtgaatgcaactgat
gagctgagcaaagcattggctgatacacttaatattgatcatggtactgataatatggat
gcccaatttcttgctgataacggtgatgattttttcaataatcctcaaccttcagagact
agcttggctgaggagccaatgtctacaaatgtccaagagattgagcaggaaatgcctgaa
aatattgtgccatctgatccatcaattgacaaaagtattcaacatgcattggtagttgga
gactacaaaggtgctgttaatcagtgccttgcagcaaatcgtatggctgatgctctggtt
attgcccatgctggtggttctgctctatgggagagcaccagaaaccaatatcttaagaac
agtatctcaccctatttaaaggttgtttctgctatggttggcaatgacttgatgagtttt
gtgagtacatggccactaaatgcatggaaggaaacacttgcactactgtgcacatttgcc
gggaaagaggaatggaatgttttatgtgacactcttgcatctagacttctgagtgctggt
gatatgctagctgcgaccctatgttacatttgtgctggaaatattgataaagctgttgaa
atatggtctcgcaacctgagctctgaagatggtggaaagacttatgttgatcttctccag
gatttgatggagaagaccattactctcgcccttgccacgggccataagaggtttagcgcg
tctctatctaagcttgttgagaactatgcagagctgttggccagtcaaggccttcttaaa
actgcaatggagtacttgaagcttatgggagcagatgaaaattcagatgagctgactata
ctgagagatcgaattgcattttctacagaagagaatgatgctaccaggagttctgttcca
gagagtagtgccaacagctcctcctacctaccaaatcaacagagctacaccccagaccct
tcccagaatctttaccaggtgcctcaacaatataataatgtgcaaagctatccagaagtt
tacccgcaaccacctaatagtagagccaatgtgccaagcaatacttatccagaagtttac
ccgcaatcacacaatgcagcctactcgggatatgctggatatcaacctcaacatcaaaca
caaatgtttgttcctcaaaacacaccagtggacacccagccaagcccggctccattcccg
gttccacatcaaacagtgaagacatttactcctgcaaacgtaccgagtctcaaaaaccca
gagcaatatcaccaagtaagtaccttgggttcccagctctacacgcctcctgcgaattca
tcatatgctcctggaccacctgcccagttccaaagtggacctcccaccacgtttcatcag
cctgcaccgccggctcaataccagactgttccacccgtcccttcagttccaggaacaaac
cctaaccagatgtttacccctgctgttccgactaattcagcttctaggtttataccgtca
accaatcaaggttttgttcagcggccaggcttgagtcctgcacagccctcaagtccaaca
caggcgcaaccaccagctcagcctaccgttgctcctcctgcacctccccccactgtgcaa
acagctgatacatcgaatgtgtctgctgagctgagacctgttattgcaacactgaccaga
ctatttgatgagacttccaaagccttgggaggtgcaccagctaaaaaacgtgaaattgaa
gacaactcaaagaagattggggcattatttgccaaactcaacactggagatatatctcca
aatgtttcatcaaaactcattcagatgtgcagtgcacttgatagtagtgattttgccact
gcaatgcaacttcagattcttctgacgaccagtgattgggatgagtgcaacttttggctc
tcatcattgaagcgtatgatcaagacaaggcaaagcttcagagtgtaa

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