Triticum dicoccoides (wild emmer wheat): 119353697
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Entry
119353697 CDS
T07278
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119353697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119353697
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119353697
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
119353697
NCBI-ProteinID:
XP_037476246
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All DBs
Position
2A:complement(112003735..112007624)
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AA seq
262 aa
AA seq
DB search
MSAAAAAADTYSPAAEAGSKRRERREELRRHLAEDADWPRADGRSLHDCRPAFMQTGSTT
AASGSAYAEFGKTKVIVSVFGPRESKKAMLYSDTGRLNCSVSYTTFATGIRGQGLENKEY
SGMLHKALEGAVMLHTFPKTTVDVFALVLESGGSDLPIIISCASLALADAGIMMYDLVTS
VSVSCLGKNVLIDPTSDEEAWQDGGLMVSYMPARKEITQLTLTGEWTDGKITNAVELCMD
ACSKLCEILRERLKDPASLASE
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggcggcggcagctgcggacacgtactccccggccgcggaggctgggagcaag
cgccgggagaggagggaggagctgcggcgccacctcgccgaggacgccgattggccccgc
gccgacggccgctccttgcacgactgccgccccgcatttatgcaaacagggtcaactact
gctgcatcagggtctgcttatgcagaatttgggaagacaaaggtcattgtgtcagtgttt
ggcccaagggagagcaagaaagcaatgctgtacagtgacactggtaggctcaattgcagt
gtgagctatacaacatttgccactggtatacgtggacaggggctggaaaacaaggagtac
tctggaatgcttcacaaagccctggaaggcgcagtaatgctacatacttttccgaagaca
actgttgatgtttttgcgttggttcttgagtctggtggcagcgatcttcccattataata
tcttgcgctagtcttgcactggcagatgctgggattatgatgtatgaccttgttacatca
gtatccgtgtcctgtttagggaagaacgttctcatcgatccaacctcagacgaggaggca
tggcaagacggaggccttatggtatcttacatgccggcccgcaaggagattacacaactt
acgctgactggggagtggactgacggcaaaatcaccaatgcagtagagctctgtatggat
gcttgcagtaagctctgcgagatattgcgggagcgcttgaaagaccctgcgagcttggcg
agcgaatga
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