Triticum dicoccoides (wild emmer wheat): 119353729
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Entry
119353729 CDS
T07278
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03013
Nucleocytoplasmic transport
tdc03015
mRNA surveillance pathway
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119353729
09122 Translation
03013 Nucleocytoplasmic transport
119353729
03015 mRNA surveillance pathway
119353729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119353729
03041 Spliceosome [BR:
tdc03041
]
119353729
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119353729
Spliceosome [BR:
tdc03041
]
Complex C
Other components
EJC/TREX
119353729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
119353729
NCBI-ProteinID:
XP_037476282
LinkDB
All DBs
Position
2A:complement(120315674..120320557)
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AA seq
818 aa
AA seq
DB search
MTTYPVLNDQPIDQWNFAELKDELSRRNLPTDGLKDDLVKRLFEELQGDILGGEGPVGGS
PPDDDLKEDETPGSADASVCQAAVEQNVDEGPSQVATLEGYPVGSVTEASEKGADATTEV
IQDALVSTEEVSQTTLVAEVSEKSADATTEVSQNAVVSTEEDSQTTLVAEASEKSADATT
EVSQDAVVSNEEVSQTTLVAATEVSDAPLVDMAKADEISPSDAVATNGDHLESAPSGSNI
VKEASPQADRHSEIIAEKAPEEGTIKKVIANYLPCDVASTDVKLDATSAKDKLDADIVEQ
DAVSSPPDASASHVDPLDVDAVAAAPGQNAETLIPVIDLSDNALMNGKDLEDSGRTNSTC
KPTVAGTNDQVTEVNPVLGSQIKCVPIPHDNISTNVKGDLNADNSDLEIEVKRDMVKPPC
NIPSVGDDLQALDDDKELSKNGTPLQEIESKSNMILDKKEDSPDGAFPEKLNLDRSSIEE
DVMESKHVDTIIRSDDLGGKTAVTSDHEEVKEVILFNTVANDSSVETMDIVHEEKLVTSS
EKRKLEDQEVVADEPIKRQRHVDTLKIPKQQTSKLSSSDSPKVVVRPALKHFVGRSNSTA
SGGSHKERIVPLPQKPATTSLRVDRFVRPFTLKAVQELLGRTGSVCSFWMDDIKTHCYVT
YSSVDEAIATRNAVYNLQWPLNNGSYLAAEFVDPLEVKLKIEHPPPLPLPTSLGKDTTPN
AAAIQQAEANQTMLHRGAGAAWGLSPTPQPHTKLYTTSNPRSEREVLPPSPKQPETTIKT
LDDLFRRTQASPMIYYLPLSEEEVAAKLAARRRRNWRR
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgtatcctgtgctgaatgaccagccaattgatcagtggaactttgcagaactg
aaggatgagctctctaggaggaacttacctaccgatggcttgaaggatgatcttgtgaaa
aggctctttgaggaacttcagggtgatatacttggtggagaagggccagttggtggatct
cctcccgatgatgatctcaaagaggacgaaacccctggttcggctgatgcatctgtttgc
caggctgcggtggaacaaaatgttgatgaaggtccttctcaggttgcaaccctggaagga
tatcctgttggttctgttacagaggctagtgagaaaggtgccgatgctactacagaggtt
attcaggatgctctagttagtaccgaagaagttagtcagacaactcttgttgcggaggtt
agtgagaaaagtgccgatgctactacagaagttagtcagaatgctgtagttagtaccgaa
gaagatagtcagacaactcttgttgcagaggctagtgagaaaagtgccgatgctactaca
gaagttagtcaggatgctgtagttagtaacgaagaagttagtcagacaactcttgttgct
gctactgaagttagtgatgctcctcttgttgatatggcaaaagctgatgaaatttctcca
agtgacgcagtggcaaccaacggagatcacctagaatcagctccaagtggcagtaatata
gtgaaggaagcatctccacaagctgatcgtcatagtgagattattgcagagaaggctcca
gaagaaggcaccatcaagaaagtgattgctaattatctaccatgtgatgttgccagtact
gatgtcaagttagatgcaacttctgctaaagacaagttagatgctgatattgtagagcaa
gatgcagtatcatcacctccagatgctagtgcgtcacatgttgatccattggatgttgat
gctgttgcagctgcaccaggacaaaatgctgagaccctgattcctgtgatagatttgagt
gataatgctttgatgaatggcaaggacctcgaagattctgggcgcacaaacagtacctgc
aaaccaaccgtggcagggacaaatgaccaggtaactgaggtcaatcctgttctaggttct
caaatcaagtgtgttccgattccgcatgacaatatatcaactaatgtaaaaggtgacctg
aatgctgacaattctgatttggaaatagaggttaagagggatatggtcaaaccaccatgc
aacattccctccgtaggtgatgatttgcaggcattggacgatgacaaagagttgtctaag
aacgggaccccattgcaagaaatagaatctaaatccaatatgatcttggacaagaaagag
gacagtcctgatggcgcttttcctgaaaaactaaatttagacaggagctcgatagaggag
gatgtgatggaaagtaagcatgttgataccattatcagatctgatgatcttggaggaaag
actgcggttacctcagaccatgaagaggtaaaagaggtgatcctctttaatactgttgcc
aatgattcatctgtggagacaatggatattgttcatgaagagaagctagtaacttcatct
gaaaagaggaaacttgaagaccaagaagttgtcgcggatgagcccatcaaacgtcagcgc
catgtggatactctcaaaattcctaagcaacaaacatccaaactaagtagctctgattct
ccaaaggttgtggttcggcctgctctaaaacattttgttggcaggtctaattcaacagca
agtggaggttctcacaaagagcggatagtgccacttcctcagaagcctgcaacaacttcc
ttgagagttgaccgatttgtgcgcccatttactttgaaagctgtgcaagagcttcttggt
agaactggatctgtttgcagcttctggatggatgatatcaagacccactgctatgttaca
tactcttcagtggatgaagctatcgctaccaggaatgctgtttacaacctccaatggccc
ctaaacaatggcagttacttagctgccgaatttgttgatccacttgaggtgaagcttaaa
atcgaacaccctcccccactgccactgcctaccagcctcggcaaggatacaacgccaaat
gcagcagccatccaacaagcggaggctaaccaaaccatgcttcaccgtggcgctggtgcc
gcatggggtctgtcacctactccacagcctcatacaaagttgtataccacatctaacccc
aggtcggaaagggaggtgcttccaccttctccaaagcaaccggaaacaactatcaagaca
cttgatgatctcttcaggaggacacaggcctctccgatgatctactacttgcccttatcg
gaggaggaggtggcagccaagctcgcagcacgccgcaggcgaaattggagacggtag
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