Triticum dicoccoides (wild emmer wheat): 119353862
Help
Entry
119353862 CDS
T07278
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119353862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdc03041
]
119353862
Spliceosome [BR:
tdc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
119353862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_EML
NBCH_WD40
WDR90_beta-prop_4th
ANAPC4_WD40
PRP4
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Beta-prop_WDR75_2nd
WD_LRWD1
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
WD40_like
Motif
Other DBs
NCBI-GeneID:
119353862
NCBI-ProteinID:
XP_037476454
LinkDB
All DBs
Position
2A:143232256..143243146
Genome browser
AA seq
517 aa
AA seq
DB search
MENPRPLPPAITPPMAPLPVHPPIAPVPVPVPPRAPASTSAAAGGGDDDEVGYEVSDDHR
AARERHERAVQELLQRRRAYAMAVPTNDSAVRARLRRLGEPVTLFGEGAMERRDRLRALM
ARLEAEGQFDRLLRAQEDEQVVPGDDDDDEGAEQIKYPFFTEGTNQLLQARVDIAMYSLP
RAKARVERAKRRLADPDEDPEAEAALVVKQAADFALERSEIGDDRPLTGCSFSRDASMLA
TSSWSGIVKVWSLPQITRIATLKGHTERATDVAFSPVDNCLATASADKTAKLWNSDGSLL
MSFDGHLDRLARLAFHPSGKYLGTASFDKTWRLWDINTGTELLLQEGHSRSVYGVSFHPD
GSLAASCGFDASARVWDLRSGRLYCTLIGHVKPVLGVTFSPNGHLVATASEDNFCRIWDL
RTRQMLYSIPAHKSLISHVKFEPQEGYYLATSSYDTKAALWSTRDYKPIKSLSGHESNVT
SLDISGDGQQIVTVSLDRTIKIWSCRGSARDNEMELD
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccccaggcccctaccccctgccatcacccctcccatggcccccctccccgtc
cacccacccatcgcccccgtccccgtccccgtcccaccccgcgcccccgcctccacatcc
gccgctgccggaggcggggacgatgacgaggtcggctacgaggtctccgacgaccaccgc
gccgcgcgggagcgccacgagcgcgccgtgcaggagctcctgcagcgccggcgcgcctac
gccatggccgtgcccaccaacgactccgccgtgcgcgcgcgcctccgccgcctcggcgag
cccgtcacgctcttcggcgagggcgcgatggagcgccgcgaccgcctgcgtgcgctcatg
gcccgcctcgaggccgagggccagttcgaccgcctcctccgcgcgcaggaggacgaacaa
gtagtcccgggcgacgacgacgacgacgagggcgcggagcagatcaagtacccgttcttc
accgaggggaccaaccaactgctccaggcgcgcgtcgacatcgccatgtactcactgccc
cgcgccaaggccagggtcgagagggccaagcgacgcctcgccgaccccgacgaggacccc
gaggcagaggccgcccttgtcgtgaagcaggcggcggatttcgcgcttgagcgcagcgag
attggagacgaccgcccgctcaccggctgctccttctcccgggatgcctcaatgctcgcc
acaagctcctggagtgggatcgtcaaagtatggagcttgccacagataaccagaattgca
accctgaaaggccatacagaacgtgcaactgatgttgccttctccccagtcgacaactgc
ttagcgacagcctcagctgataaaactgccaaattgtggaacagcgatgggtcacttctg
atgtcttttgatggccacctggatcgtcttgctcgccttgcttttcatccatctggaaag
taccttggtacagctagctttgacaagacctggagattgtgggacatcaacactggaact
gaacttctactccaggagggacatagcagaagtgtatatggtgtcagctttcacccggac
ggttctttagctgcatcttgtgggtttgatgcgagtgctcgagtttgggatctaagatca
ggaagattgtactgtaccctcattggacatgtcaaacctgtcctaggagtcaccttctca
cctaatggtcatctggttgcaaccgcgagtgaagacaatttctgtcgaatatgggatctg
aggaccagacaaatgttatattctataccagcacataagagtctcatctcgcatgtgaaa
tttgaaccccaggagggttattatttagcaacatcttcctatgacactaaagcagcgcta
tggtcaactcgggattacaaaccaattaaaagcttgtcaggccatgagtcaaatgttact
agtctggatattagtggagatggacaacagattgtgactgtttcacttgatagaacgata
aagatctggtcatgcagaggcagcgcgcgggataatgagatggagttggattaa
DBGET
integrated database retrieval system
