KEGG   Triticum dicoccoides (wild emmer wheat): 119354279
Entry
119354279         CDS       T07278                                 
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1-like isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    119354279
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tdc03400]
    119354279
DNA repair and recombination proteins [BR:tdc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     119354279
SSDB
Motif
Pfam: Tyr-DNA_phospho FHA_2 FHA PIG-S RelB-like
Other DBs
NCBI-GeneID: 119354279
NCBI-ProteinID: XP_037476893
LinkDB
Position
2A:214063755..214072396
AA seq 669 aa
MSSSSRVRVGTLVPFVEGKSGSPNASSLPMPSIPIFKGSNVVGRSNLVAVDKRVSRKHLS
LRALPDGSLEVVVEGTNPIVVQSEGQRRKVCAQQRAKIMHDDVLELIPGEYFMKYVNMSD
ERKSSTSVESHDLKKGKRHSEEDSVAAKRNRQVMEDEALARTLQESFAEESTSVTEVLSS
LDSAGSSERNKERTHSVGPLKDTLPLTFRLMRVQGLPSWTNTSTVTIQDVIQGEVLLAVL
SNYMVDMDWLLTACPSLRKVPHVLVLHGEDGASLERLKKTKPANWILHKPPLPISFGTHH
SKAMLLVYPQGIRVVVHTANLIHVDWNNKSQGLWTQDFPWKEANDMSTNIGFENDLVDYL
RALKWPEFRVNLPVAGDVNINAAFFRKFDYSSSTVRLIGSVPGYHVGPNMKKWGHMKLRS
VLEECVFEKQFCKSPLIYQFSSLGSLDEKWMTEFACSLSAGKADDGSQLGIGKPLIVWPT
VEDVRCSIEGYAAGSCIPSPQKNVEKDFLRKYWSRWKADHVGRCRAMPHIKTFTRYNGQN
IAWFLLTSSNLSKAAWGALQKNNTQLMIRSYELGVLFLPKTLQSVPQFSCTDKSRSNLDK
LALGKNIKTKLVTLCWKGDEGKDPSAEAVRLPVPYQLPPQLYGPEDVPWSWDRRYTKKDV
YGSVWPRHG
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgtcgtcttcctcccgagtaagggttgggactctggttcccttcgttgaaggcaaatct
gggtcaccgaatgcgtcgtcgttgccaatgccaagcattcccatcttcaagggctccaat
gtcgttgggaggagtaatttggtggctgttgacaagagagtcagccgcaagcatttgagc
ctgcgcgccttgcctgatggctccctcgaagtcgtcgtggaggggacaaatcccattgtc
gtccaatcagagggtcagagaagaaaagtttgtgctcagcagagagccaagattatgcac
gatgatgtcctggagctgattcccggtgaatattttatgaagtatgtcaatatgagtgat
gagcgtaaaagttccacatcagtcgagtcacatgacttaaagaaagggaagaggcatagc
gaggaagatagtgtagctgcgaagagaaatcgacaagttatggaagatgaggctttggca
agaacattgcaggaaagctttgcagaagagagtacatctgttactgaagtattaagttca
cttgatagtgctggttcttccgagagaaacaaagagagaacacattctgtcggtcctttg
aaagatacacttccgttgacttttcgactcatgcgtgtccaaggtcttccgtcatggact
aacacttcaacagttaccattcaggatgtcatacagggtgaagtgcttcttgctgtactc
tcaaattatatggtggacatggattggttgcttactgcatgtccaagtctaaggaaagtt
ccacatgtcctagttctgcatggagaagatggtgcttcattggagcgcttgaagaaaacg
aagcctgcaaattggatccttcacaagcccccgctcccaatatcatttggaacacatcat
tcgaaggccatgctgcttgtatatcctcaagggattcgtgttgttgttcacactgcaaat
ttgatacatgttgactggaacaacaaaagtcagggactatggacacaagattttccctgg
aaggaagcaaatgatatgagtacaaatattggttttgagaatgacctggttgattatctc
agggcacttaagtggcctgagttcagggtaaatctcccagttgctggtgatgtcaacatc
aatgcagccttctttcggaaatttgattatagtagctcaacggtcaggttgatcggatct
gttcctggttatcatgtcggccccaatatgaaaaagtggggccatatgaagcttaggagt
gttcttgaagagtgcgtatttgaaaagcagttttgcaagtcaccacttatttatcagttt
tcgtccttggggtcacttgatgagaaatggatgactgagtttgcatgttcgttatcagct
ggtaaagcagatgatggatcacagttgggtatcgggaaaccactgattgtatggccaaca
gtggaggatgttaggtgctcaatagagggctatgcagctggcagttgcattccaagtcct
caaaagaatgttgagaaagatttcttgcgaaaatattggtccaggtggaaagcagaccac
gtaggccgttgccgtgctatgccgcacataaaaacttttactcgctacaatggtcaaaat
attgcatggtttctgcttacctcatcaaatttaagcaaagctgcttggggagcactgcag
aagaacaatacacagctgatgatacgatcatatgagttaggtgtattgttcttgcccaaa
actctccagtctgttccacaattttcatgcacagacaagagccgctcaaacctggataaa
cttgcccttggtaagaacatcaagaccaagctggtgacactttgctggaaaggcgatgaa
gggaaggatccatctgcagaagctgtgagattgccagtgccgtatcaactccctccacaa
ctctacggcccggaagatgtcccatggtcttgggatcggaggtacacgaagaaggatgtg
tatggctcagtctggccacgccatggctag

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