Triticum dicoccoides (wild emmer wheat): 119354958
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Entry
119354958 CDS
T07278
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119354958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdc03041
]
119354958
Spliceosome [BR:
tdc03041
]
Complex A
Other components
Complex A specific factors
119354958
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
zf-CCHC
KH_12
eIF3g
RRM_5
PHD_4
KH_PNO1_2nd
DUF6319
RRM_Nup35
RRM_7
Motif
Other DBs
NCBI-GeneID:
119354958
NCBI-ProteinID:
XP_037477625
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Position
2A:477772465..477776150
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AA seq
752 aa
AA seq
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MASAETLVRSPSREPSSDPPRDASRDASSEPHHNGSANAAGDGDSSSRRRRRSRWEQSND
ESGANSGGEGGAGGRKRKSRWAEEEPRPTIALPDFMKDFAAEMDPEVHNLNSRLLEISRL
LQSGLPLDDRPEGARSPSPEPIYDNLGIRINTREYRARERLNRERQEIISQLIRRNPAFK
PPADYRPPKLHKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEG
KLLQKRDLKPDPSENEDLHVLVEADTEEALEAAAGMVEKLLTPVDEVLNEHKRQQLRELA
ALNGTIRDDEFCRTCGEPGHRQYACPNRTTTFKSEVQCKICGDGGHPTIDCPVKGTSGKK
MDDEYQNFLAELGGSAPESMNKSGGPMLAITGGGGGGGGGGGGSGSNSPWAGGNGAATTG
ANGLKKDYDETNLYIGYLPPMFDDSGLINLFSQFGEIVMAKVIKDRNTGQSKGYGFVKYS
DVSQANAAIAAMSGYHLEGRTIAVRVAGKPPQPAAPPGPPAAPVPQMYHSADPSAGGYNS
QPYMGGHPPPPAPPGSYAPVPWGQPPPYASYPPPPPPGMYNPPPGQTAPHSYGMQYPPPP
APVPPPGTTSNDGAQNYPPGVTPPSSGAPTQPVPAPAYGTSGAQNMPHMYPPPPYGYAPY
YPSVTPVQPPPPPPPPASVDPSQSIATAPWATHNAPPPPPPPASVDSSQSIATAPWATHN
APPPPPLPSSNDQPTPPYGADAEYDKFMSEMK
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgccgaaaccctagtccgctccccatctcgcgagccctcgtccgacccgccc
cgcgatgcctcgcgcgacgcctcctccgagccccaccacaacggctcagccaacgccgct
ggcgacggcgactcgtcctcccgccgccgccgccgcagccgatgggagcagtccaacgac
gagtccggtgccaattcaggcggcgagggcggcgcgggaggacggaagcggaagtcgcgc
tgggccgaggaggagccccgcccgaccatcgcgcttccggatttcatgaaggacttcgcc
gccgagatggatcccgaggtgcacaacctcaactcgcgcctcctggagatttcgcgcctg
ctgcagtcggggctccccctcgacgaccgcccagagggcgcccgctcgccgtcccctgag
ccaatatacgataacctgggcatccgcatcaacacccgcgaataccgggcgagggagcgc
cttaaccgcgagcggcaggagatcatctcccagctgatccgccgcaatcccgccttcaag
cccccggcggattaccgcccacccaagctccataagaagctctacatccccatgaaggag
taccctgggtacaactttattgggctcattattgggccccgtggcaacacacagaagcgg
atggagaaggagacgggggccaagatcgtaatccgagggaagggcagcgtcaaggaaggg
aagttgctgcagaagagggacttgaagccagatcccagtgagaatgaggaccttcatgtg
cttgttgaggctgatactgaagaagcgttagaggctgctgcaggcatggtggagaagctg
cttacccctgtggacgaagtgctaaatgagcacaaacgacagcagctgcgggagcttgca
gccctgaatggaacaatcagggacgatgagttttgtaggacttgcggggagccgggtcac
cgacagtatgcatgcccgaacaggacaacaacgtttaagagcgaggtgcagtgtaagatc
tgtggcgatggtggccacccgacaattgattgtccagtgaagggcacatctgggaagaaa
atggacgacgagtaccagaacttccttgctgagcttggtggtagtgcacctgagtccatg
aacaagtctggtggtccgatgctggctataacaggtggtggtggtggtggtggcggcggc
ggcggcggtagtggtagcaactcaccctgggctgggggtaatggtgcagcaacaacagga
gccaacgggctcaagaaggattatgacgagaccaatctttatattgggtacttgccacct
atgtttgatgattcagggctgatcaacctattttcacaatttggggagattgtcatggca
aaggttataaaggatcgcaacacagggcagagtaaagggtatggatttgtgaaatattca
gatgtctcacaggctaatgcagctattgctgcaatgagtggttaccatcttgaagggaga
actattgcagtccgagttgcaggcaagccaccacagccagctgccccccctggtcctcca
gcagcgccagtaccacagatgtaccactctgcagatccttctgctggtggctacaactcg
cagccctacatgggaggacatccaccaccaccagctcctccaggtagctatgctccagtt
ccttgggggcaaccaccaccttatgcttcgtaccctccgccgccaccaccaggcatgtac
aatcctccacctggccaaactgctccacattcatatggtatgcaatacccaccaccacca
gctccagtacctccaccaggcactacgtcaaatgatggtgcacagaactaccctccgggt
gtaacaccaccaagttctggtgcacctacccagcccgtccctgctccagcatatgggacc
tctggtgcgcaaaacatgccacatatgtaccctccaccaccttatggttatgccccatat
tatccatctgtcacaccagtccagccgcctccaccaccacctccaccagctagtgttgat
ccttcacaaagcattgcaactgcaccttgggccactcacaatgcacctcctccaccgcca
ccgccggctagtgttgattcctcacagagcattgcaacggcaccttgggctacccacaat
gcaccgccgccaccacctttgccatcctccaacgaccagcccactcctccctatggtgct
gatgcagagtatgataaatttatgtcggagatgaagtga
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