KEGG   Triticum dicoccoides (wild emmer wheat): 119355268
Entry
119355268         CDS       T07278                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    119355268
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tdc03019]
    119355268
Messenger RNA biogenesis [BR:tdc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     119355268
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     119355268
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 119355268
NCBI-ProteinID: XP_037477951
LinkDB
Position
2A:542087853..542094288
AA seq 128 aa
MSWAGPDEILLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEL
YCDVPLGLYVIRGENVVLIGELDREKDELPSHMTCVSEAEIRTAEKAEKEARDLKGTMRK
RMEFLDFD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggccgggcccgacgagatcctcctctccacctccctggccggcttcttagat
aaaaaacttattgtcctactacgagatggacgaaagctgcttggcactctctgctcattc
gatcagtttgcaaatgttgttcttcagggtgcttgtgaacgagtaattgtgggcgaatta
tattgtgatgttcctcttggtttatatgtgatccgcggagagaatgttgtattaattgga
gaactggatcgcgagaaggacgaactccctagtcacatgacttgtgtttcagaggctgaa
ataagaacggccgagaaagccgaaaaggaagcaagggatctgaaaggcacaatgaggaag
aggatggagttcctagacttcgattag

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