Triticum dicoccoides (wild emmer wheat): 119355268
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Entry
119355268 CDS
T07278
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119355268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119355268
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119355268
mRNA degradation factors
5'-3' decay
Lsm complex
119355268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
119355268
NCBI-ProteinID:
XP_037477951
LinkDB
All DBs
Position
2A:542087853..542094288
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AA seq
128 aa
AA seq
DB search
MSWAGPDEILLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEL
YCDVPLGLYVIRGENVVLIGELDREKDELPSHMTCVSEAEIRTAEKAEKEARDLKGTMRK
RMEFLDFD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggccgggcccgacgagatcctcctctccacctccctggccggcttcttagat
aaaaaacttattgtcctactacgagatggacgaaagctgcttggcactctctgctcattc
gatcagtttgcaaatgttgttcttcagggtgcttgtgaacgagtaattgtgggcgaatta
tattgtgatgttcctcttggtttatatgtgatccgcggagagaatgttgtattaattgga
gaactggatcgcgagaaggacgaactccctagtcacatgacttgtgtttcagaggctgaa
ataagaacggccgagaaagccgaaaaggaagcaagggatctgaaaggcacaatgaggaag
aggatggagttcctagacttcgattag
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