Triticum dicoccoides (wild emmer wheat): 119355704
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Entry
119355704 CDS
T07278
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03022
Basal transcription factors
tdc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119355704
09124 Replication and repair
03420 Nucleotide excision repair
119355704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdc03021
]
119355704
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119355704
Transcription machinery [BR:
tdc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119355704
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119355704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Tfb4
IBR
IBR_1
Motif
Other DBs
NCBI-GeneID:
119355704
NCBI-ProteinID:
XP_037478448
LinkDB
All DBs
Position
2A:complement(611305735..611309278)
Genome browser
AA seq
430 aa
AA seq
DB search
MYGVGVGGGGGGFNAPSTASGRRKNQEDDDDEEEEETGDGRVLEAWERAYADDRSWEALQ
EDESGLLRPIDTKNLVHSQYRRRLLLRSAAAAARIQKGLIRYLYIVIDLSKAASEMDYRP
SRMAVVAKCAEAFIREFFDQNPLSHVGLVTIKDGISHRLTEIGGSPESQINALMGKLECS
GDSSLQNALELVNGYLNQIPSYGHKEVLFLYSALNTCDPGDIMETIEKCKKSKVRCSVIG
LAAEIFICKHLCEETGGSYTVALDESHFKELLLEHAPPPPAIAEYAAANLIKMGFPQRGA
EDLISICSCHKKIKSGAEGYICPRCKVNVCELPTECRTCGLTLVSSPHLARSYHHLFPVA
PFDEVTFKLGQKGGQNCFGCQQSLINTGGQSNIHVCCPKCKHHFCFDCDIYIHESLHNCP
GCESQCSSSR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcgtcggcgtcggcggcggcggaggcgggttcaacgcgccgtccacggcctcc
gggcggcgcaaaaaccaggaggacgacgacgacgaggaggaggaggagaccggcgacggc
cgcgtcctcgaggcgtgggagcgcgcctacgccgacgaccgctcgtgggaggcgctgcag
gaggacgagtccggcctgctccgccccatcgacaccaagaacctcgtccactcgcagtac
cgccgccgcctcctgctccgctccgcggccgccgcggcccgcatccagaagggcctcatc
cgctacctctacatcgtcatcgacctctccaaggcagcttcagaaatggattatcgccct
agtcgaatggctgttgttgctaagtgtgctgaggcattcataagggaattcttcgatcag
aatcccttgagccatgttgggttagtgacaattaaagatggcatttctcatcgacttacg
gagattggagggagtccagagtcacagattaacgcattgatgggcaagcttgagtgttct
ggtgattcatctctgcagaatgctctagaacttgtcaatggttacttgaaccagattcct
tcctatggtcacaaggaagtattatttttgtactccgcactgaatacatgtgatcctggt
gatatcatggagacaatagaaaaatgcaagaaatccaaagttagatgttcggttattggg
cttgctgcagaaattttcatttgcaagcatctctgtgaagagactggtggatcatatacg
gttgcactagacgagtcccacttcaaggaattgctgcttgaacatgctcctccaccacct
gccattgcagagtatgctgcagctaatttgattaagatgggttttccacagaggggagca
gaggatcttatctccatctgctcttgtcataagaaaattaaatctggtgctgaaggttac
atatgtcccagatgcaaagttaatgtctgtgagcttccgacggagtgccgaacatgtggt
ctaacacttgttagttctccacatctggcacgatcctatcaccatctcttccctgtagcg
ccatttgatgaggtgacgttcaaattaggtcaaaagggaggacaaaattgttttggctgc
cagcagagtctcattaacaccggtggccagtctaatatccatgtctgctgtccaaaatgc
aagcaccacttctgcttcgactgtgatatttacatccatgagagcttgcataactgcccc
ggttgcgagagtcagtgcagttcatctcggtag
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