Triticum dicoccoides (wild emmer wheat): 119355751
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Entry
119355751 CDS
T07278
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 6-like isoform X1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119355751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119355751
03036 Chromosome and associated proteins [BR:
tdc03036
]
119355751
Enzymes [BR:
tdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119355751
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
119355751
mRNA degradation factors
5'-3' decay
Decapping complex
119355751
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
119355751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NA-iREase2
TFIIA
Motif
Other DBs
NCBI-GeneID:
119355751
NCBI-ProteinID:
XP_037478511
LinkDB
All DBs
Position
2A:complement(615784026..615791337)
Genome browser
AA seq
501 aa
AA seq
DB search
MDQRARYPPGIGNGRGGNPNYHGRGPPPTQQHQHQQQQQAQGHQQQHMERQSQRSQHHNQ
QLQHQQWLRRNQTASEAAAGAAKASEHHAPAAADDADLSPQDWKAQLKLPPPDTRYQTED
VTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAA
FCIPALEKIDQDKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIV
RLYQPVHLLVGTPGRVLDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEHLIRYLPSS
RQILMFSATFPVTVKAFKDKYLPKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFS
KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACGNLVC
TDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLVTYEDRFNLYRIE
QELGTEIKPIPPQIDRTIYCQ
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggatcagcgggcgaggtaccctcccggcatcggcaacggccgcggcgggaatcctaac
taccacggccgtggcccgccgccgacgcagcagcatcagcatcagcagcagcagcaggcg
caggggcaccagcagcagcacatggagcggcagtcgcagcgctcgcagcaccacaaccag
cagcttcagcatcagcagtggcttcggcggaatcagaccgctagcgaggccgccgcgggc
gccgccaaagccagcgagcaccacgcgccggctgccgccgatgacgccgatttgagtccg
caagactggaaggcccaattgaagcttccacctccagatacacgctaccagaccgaggat
gtcactgcaactaaaggaaatgaatttgaagactattttctgaagcgtgaacttcttatg
ggcatatatgagaaaggatttgaaagaccgtctcctatccaagaagaaagcattcctatt
gcattaaccggcagcgacattcttgcaagagcaaaaaatggaacaggcaagactgctgca
ttttgtatacctgcgctagagaagattgatcaagacaaaaatgctattcaagttgttatt
ttggtccccacgagggaattggctttacaaacatcacaagtctgcaaggaacttgggaaa
cacttgaagattcaagtcatggtcactactggaggaacaagcctaaaggatgatattgtc
cgtctttatcaacctgtgcatttacttgtggggacgcctggtcgtgttttggaccttaca
aagaaaggcatttgcattctgaaggactgttcaatgcttattatggatgaggcagacaag
cttctttctcccgagttccaaccttccgtggagcacttaattcgataccttccatcgagt
cgacagattctaatgttctctgcaacattccctgtgactgtcaaggctttcaaggacaaa
tatctgcctaaaccctatgttattaatcttatggacgaacttacactgaagggaattacc
cagttctacgcctttgttgaagaaaggcagaaagtccattgtctgaacactcttttttcc
aagctgcaaattaatcagtctataatattctgtaactctgtaaatcgtgttgaactactg
gcgaagaagatcacagagcttggttactcttgcttctacatccatgctaaaatgctgcag
gatcatcgtaatagagtattccatgatttccgtaatggtgcctgcgggaaccttgtgtgt
acagatctttttacaaggggaatagatatccaagctgttaatgttgtcatcaattttgat
ttccccaagaccgctgaaacctatctccacagggttggtagatctgggagatttggccac
cttggcctggctgtgaatctggtcacctatgaggatcggtttaacttgtatcggattgag
caggagcttggaactgagataaaacccatacctcctcagatagaccggacgatatactgc
caatag
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