Triticum dicoccoides (wild emmer wheat): 119355882
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Entry
119355882 CDS
T07278
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119355882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119355882
04121 Ubiquitin system [BR:
tdc04121
]
119355882
03036 Chromosome and associated proteins [BR:
tdc03036
]
119355882
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119355882
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
119355882
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
119355882
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
119355882
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
119355882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-HC5HC2H_2
RTT107_BRCT_5
zf-C3HC4_3
PHD_NSD
PTCB-BRCT
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
119355882
NCBI-ProteinID:
XP_037478662
LinkDB
All DBs
Position
2A:633940574..633944332
Genome browser
AA seq
617 aa
AA seq
DB search
MEGMRRFVNPLKLSVQKMELELTCPVCLKLLSAPTMLPCCHTCCSKCATTQAMNGHSCAI
CKLAYHPQDLRPASQIEALVNIQRSISSTVSSMSLQLGTQAAIPVAKATSQGTPESGTTS
SYNLVAAKLPCNQASGPANGNVDGVQAMDPAPGNRTNDVAVGPMVIVQTGPCGSQTPVGS
GDLECDSNDLEGELITSGSPPQSTLKRGPNVTDDSARGLKRQKSSDQSEKQPSMNAAWKC
EFCHSSEISECTGPLLHCLDEALVKDDQAWKSNVIHVHEKCAEWAPQAYFEGDMVKKLES
ELVRSSKMKCGICGLKGAALGCLFKSCRKSYHLPCARGVSGCRWDEGEFVMLCPTHSSKR
LPCERSKSKNKKAAQPQQPSSETVLGDSNSPFPMEMNELWTSLCLTSEWVICGSALSDQD
KEILDQFEYHSGVATTNNWSSNVTHVLANTNEDGACGRTRKVLLAILAGKWVVNVNWLSA
CLEAKKPVPEEPYEIRSDVHGAIDGPRIGRLRAMQKAPSLFSGLTFYFIGHPLTFKVELD
ELIAAAGGSILGKADLSSTSLIVYNKEVPKGCNEDAVDEVFSKREAEALDLATTFGCRVV
PHTWVLDSIASCTLQPI
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggagggcatgaggaggttcgtcaacccgctgaagctcagcgtgcagaagatggagctg
gagctcacctgccccgtctgcctgaagttgctcagcgcgcctacgatgctgccatgttgc
cacacatgctgcagcaaatgtgccactacgcaggctatgaatggccacagctgcgccatt
tgcaagctagcctaccatcctcaagatttaagacctgcttctcaaattgaggcgttggtg
aacattcagaggagcataagctccacggtcagcagcatgtctctgcagctcgggactcaa
gcagccattcctgttgcaaaggctacatctcaaggaactccagaatcaggaacgacaagt
tcttacaacctggttgctgcaaagctgccatgtaaccaagcatctggacctgcaaatgga
aatgttgacggtgtgcaagcaatggatcctgcaccaggaaacagaactaatgatgtggca
gttgggccaatggttattgtacagacaggaccgtgtgggtctcaaactcctgttggctct
ggggatctggaatgtgatagcaatgaccttgaaggagagttgataacaagcggatcacct
cctcagagtactttgaaaagagggccaaatgtaacagatgacagtgctagaggattgaag
aggcaaaaatcctcagatcagagtgaaaaacaaccaagtatgaatgctgcatggaaatgc
gagttttgtcactcttccgaaatcagcgagtgtactggccctttgttgcattgtctggat
gaagcactagtgaaggatgatcaagcatggaaatcaaatgttatccatgtccatgagaaa
tgtgctgaatgggctcctcaagcatactttgaaggtgatatggttaaaaagttggagtct
gagttagtccgctcttcgaagatgaagtgtggtatttgtggattaaaaggtgctgcactg
ggctgcctttttaagagctgccgcaagagctaccatttaccatgtgcccgtggggtctca
ggctgcagatgggacgaaggagagtttgttatgctgtgtcctacccattcatcaaagagg
ctgccatgtgagagatcgaagtcaaaaaacaagaaggccgcccagccgcaacagccatct
tctgaaacagtgcttggtgattcaaactcaccattcccgatggagatgaatgaactttgg
acctcactttgtctgacaagtgaatgggtgatatgtggatctgccctctctgatcaagac
aaggaaatcttggatcagtttgagtaccactcaggcgtcgcaacaaccaataactggagt
tcaaacgtaactcatgtgcttgccaataccaatgaagatggagcatgtggtaggacacga
aaggttctcctggccatacttgctgggaaatgggttgtcaatgtgaattggctgagtgct
tgcctggaggctaaaaaaccagtcccagaagagccctatgagattcgctctgatgtccat
ggcgcgattgatggcccccgtataggaaggctacgagcaatgcaaaaggcaccaagtctg
ttttcagggttgaccttctacttcattggccatcctctgacattcaaggttgagcttgat
gaattgattgccgcagcagggggatctatcttgggcaaggctgatctctctagcacatcc
ctgattgtttacaacaaggaagttccgaagggatgtaacgaagacgccgttgatgaggtt
ttcagtaagagggaagctgaggctctagacctggcaacaacatttgggtgcagggttgtt
cctcatacatgggttttggatagcatagcatcctgcactcttcaacccatctga
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