Triticum dicoccoides (wild emmer wheat): 119356211
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Entry
119356211 CDS
T07278
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119356211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119356211
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119356211
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Gene cluster
GFIT
Motif
Pfam:
Rcd1
Roquin_1_2-like_ROQ
Motif
Other DBs
NCBI-GeneID:
119356211
NCBI-ProteinID:
XP_037479036
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All DBs
Position
2A:681221627..681225233
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AA seq
327 aa
AA seq
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MANLQPSVPEPSSFAGASPPSPSSIGGGAASAAQEPRKMASAEQLVLDLCDRELRENALL
ELSKKREIFQDLAPLLWHSFGTIAALLQEIVSIYPALSPPVLSAGASNRVCNALALLQCV
ASHPDTRIPFLHAHVPLFLYPFLNTFSKTRPFEYLRLTSLGVIGALVKVDDTEVIGFLLQ
TEIIPLCLRTMEMGSELSKTVATFIVQKILLDDIGLRYVCATPERFYAVGSVLGNMVISL
ADQPSTRLLKHIIRCYLRLSDNPRACVALHNCLPDMLKDGTFNISLRDDPATRRWLQQLL
HNVTVGGMGGPGMGVPPQPGLDHMMGI
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacctgcagccttccgtccccgagccctcctccttcgcaggggcctcgccgccg
tctccatcctcgatcggtggaggcgctgcctcggcggcgcaggagcccaggaagatggcg
tcggcggagcagctggtgctcgacctctgcgaccgcgagctgcgcgagaacgccctcctc
gagctgtcgaagaaacgagagatatttcaagacctggccccgcttctctggcactctttt
ggcacaattgctgcactgcttcaggaaattgtgtcgatctaccctgcactttcaccccca
gttttgtcggcaggcgcatcaaaccgagtctgcaacgcacttgcacttcttcagtgtgtt
gcatctcaccctgataccagaatccctttcttacatgctcatgtgcccctgttcttgtac
ccgttcctgaatacattcagcaagacaaggccttttgagtacttgcggcttacaagcttg
ggtgtcatcggtgctcttgttaaggttgatgatactgaagttatcggctttctgctgcaa
actgaaataattcctctgtgcttgcgtaccatggagatgggcagtgaactgtcaaaaacc
gttgctaccttcattgttcagaagattctgctggatgatattggactgcgttacgtgtgt
gccacccctgagcgtttctatgctgtgggcagcgttttaggaaatatggtaatttcactt
gctgatcagccttccacaaggttgctcaagcacattatccgatgttacctcaggctgtca
gataaccccagggcctgtgttgcactgcataattgcctccctgacatgctgaaagatggg
acattcaacatctctcttagggatgacccggcgacaaggcgctggctccagcaactgctg
cataacgtgacagtgggcggcatgggaggacctggcatgggggtgcctccccagccaggc
ctggatcacatgatggggatatga
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