Triticum dicoccoides (wild emmer wheat): 119356263
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Entry
119356263 CDS
T07278
Name
(RefSeq) nuclear pore complex protein NUP88-like
KO
K14318
nuclear pore complex protein Nup88
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119356263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119356263
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119356263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
Cluap1
Motif
Other DBs
NCBI-GeneID:
119356263
NCBI-ProteinID:
XP_037479098
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All DBs
Position
2A:complement(686814361..686821719)
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AA seq
851 aa
AA seq
DB search
MTRITAPELSPSPPDSPPPARRSPAPATPPSRRRRPSPSPSLALTPSSASTSTTSSRPRP
RPSPKRTYSPAQWVPVSAHPAFALRGALGGGGAAWDAAGSRLYVWDPSARGAHRVSVRIR
DAEAERDGEEVAVEAAVPSEMLMPETDLGYEVTHISLNTDGSSLLLAGSHNINVLYVHER
VSEDGDTIICRTAPVASQILPTNNNGIKVLQTSWHPFSSSHFGVLTSDAVFRLFDLSFDL
EQPEQEFYLQPILPGRCQNASSICPVAFSYGSDHLWDRFSVFILFSDGSIFVLCPVVPFG
CDYSKKHIEEIYEDVNTFGLKSSNPNVVTNSHLAIAWLEATFPELLRQSADSSTLMSRAR
AYAPVDDSLSLQGPLCRVCEENNELEGKSSSCEGKAVGFVYSSVGKDSVLVTAWGSGQLQ
IDALADEIQPQWSIGVPTRLNVDSHGRIKSVAMICDSNPQDSSALRSHRSSSMGSNAKSN
TEAVWMGHSPPLLRLSIVDLALPKTSNGSSLSLFLDPLVPERFYCAHGGGLDMVTLHFLP
FSYPEMASTPPSVHPVLTTGNSDTSSPFLSGFVAIADAYGHVQLVGITYTGECFVVEMKG
WKEPTPLQLDICSKDIKDVESSTTGMISKELLAGPDPPILPSSTSLRSLTPDSIEGKSTL
HHYIKVFHEHYVEYGHKVFIELKEHEDYVKTEIEDKQKRLQAVKQSLLSIEAKDEEINRR
VERASKVYDLLEKRIESFKMLPAANKKPLSQAELEFKSQLDRFADVELDALRTSIAALST
RMKRFTQPSLGGGATGTGMAPWQAPKAGRGHVSESQMSLMKSSLERLSLLNEENNQKLRV
IETELKNKEQQ
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcatcaccgcgccggagctgtcgccctcgcccccggactccccgcctcccgcc
cgccgctccccggccccggcgaccccgccctcccgccgccgccgcccctccccgtccccg
tccctcgcgctcaccccctcctccgcctccacctccaccacctcctcgaggccccggccc
cggccctcgcccaagaggacctactcgccggcgcagtgggtccccgtctccgcccacccc
gccttcgcgctccgcggcgccctgggcggcggcggtgctgcgtgggatgccgccgggtcg
aggctctacgtctgggacccttcggcgcgcggcgcccaccgggtgtccgtgcggatccgc
gacgccgaggcggagagggacggggaggaggtcgccgtggaggccgccgtgccttccgag
atgttgatgccggagacggatcttggttacgaggtcactcatatatcactaaatacggat
gggtcatcattactcctagctggatcacataacataaatgttttgtatgtacatgagagg
gtatcagaagatggtgatacaatcatatgcaggaccgcaccagttgcttctcagatttta
cctaccaataacaatggcataaaagttctgcagacatcttggcacccttttagcagcagc
cattttggtgttttgacatcagatgctgttttcaggttatttgacctctcatttgattta
gagcaaccagagcaggaattttatttgcagccaattctacctggaagatgtcagaatgct
tcgtcaatttgtccagtggcattctcttatggcagtgatcatctgtgggatagattttcg
gttttcatcttgttcagtgatggttcaatttttgtgctctgccccgttgttccatttgga
tgtgactatagtaagaaacatatcgaagagatatatgaagatgttaatacatttgggttg
aaatcttcaaatccaaatgttgtcacgaactcacatttggcaattgcatggttggaggca
acatttccggagctgttacgtcaatcagcagatagcagcacgctgatgtcaagagctcgt
gcatatgccccagtagacgattctctaagtctacaggggcctctttgtagagtttgcgag
gaaaacaatgaactcgaaggcaagagcagctcttgtgaaggtaaagctgtgggttttgtg
tacagctctgttggcaaagattcagttcttgtaactgcctggggtagtggacagctccag
attgatgctctagccgatgaaatccaaccacaatggagcattggggttcctactcgcctt
aatgtcgattcacatggacgcataaagagcgttgctatgatatgtgactctaatccacaa
gattcgtcggccttgagatcacatcgttcatcgagtatgggatcaaatgcgaagagcaat
acagaagctgtctggatgggacactctcctcctttgctaaggctctcaattgtggatttg
gcactaccaaaaacttctaatggtagctctttatcactgtttctggatccccttgtccca
gagagattttattgtgcgcatggagggggacttgacatggtcacgttgcacttcctgccg
ttttcataccctgaaatggcttccacaccaccctcggtgcatcctgtactcaccacaggc
aacagtgatacaagttctcccttcctttctggatttgtcgccatagctgatgcgtatggc
catgtgcagttagttggcatcacatacactggcgagtgctttgtggtagaaatgaagggt
tggaaggaaccaacacctcttcagcttgacatatgtagcaaggacatcaaggatgtagaa
tcttccacaactggaatgatcagcaaagaacttcttgctggtccagatccacccatactt
ccatcttcaacaagcctgaggtcgttgactcctgactccatcgaagggaagtccacactt
catcactatattaaggttttccatgagcactatgtggagtatgggcacaaggttttcatt
gagctcaaggaacacgaagattatgtgaagacagagattgaagacaagcagaaacgccta
caagcagtgaagcaatcacttctatccatagaagccaaagatgaggagataaacaggcgg
gtcgaacgggcctccaaggtgtatgatctgttggagaagcgcatagaaagcttcaagatg
ctgcctgccgcaaacaagaaaccattgtcacaggcagagctggagttcaagtcacagctt
gataggtttgcggacgtggagctggacgctctgcgtacttccattgctgccctgagcacg
aggatgaaacggttcacccaaccgtctttggggggtggtgcaaccggcacaggaatggcg
ccatggcaggcgccgaaggccggaagaggccacgtttcggagtcccagatgtcgctgatg
aagtcttcgctggagaggctgtcgctcctcaacgaggagaacaatcagaaactacgggtc
atcgagactgagctcaagaacaaggaacagcagtag
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