Triticum dicoccoides (wild emmer wheat): 119357114
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Entry
119357114 CDS
T07278
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4-like
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tdc04812
]
119357114
Cytoskeleton proteins [BR:
tdc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
119357114
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_EIPR1
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_Aladin
Beta-prop_WDR41
eIF2A
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_Vps41
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
Beta-prop_IP5PC_F
Beta-prop_ACSF4
PAN2_N
WDR54
Motif
Other DBs
NCBI-GeneID:
119357114
NCBI-ProteinID:
XP_037479999
LinkDB
All DBs
Position
2A:complement(766695001..766703367)
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AA seq
925 aa
AA seq
DB search
MTTNTKRAYKLQEFVAHASNVNCLKIGRKTSRVLVTGGEDHKVNLWAIGKPNSISSLPGH
TSAVESVAFDSTEVFVAAGAASGTVKLWDLEEAKIVRTLTGHRSNCMSVDFHPFGEFFAS
GSLDTNLKIWDIRRKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDSAVKIWDLTAGKLL
HEFKSHEGQIQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSTGPEMTGVRSMTFNPD
GRSLLCGLHESLKVFSWEPIRCHDTVDVGWSRLSDLNVHEGKLLGCSSNQSCVGIWVVDL
TRLEPHATSTSALLNGRSELKTSSGGTMPLQNDSGSRANIGRSSALQNSENNLKASTGRL
SVSQNSDSAPKEIKPTAPSGLVPSTPQRVGTGSSTRTAGNSTYASGGTTLKRSSLKSNST
SNLHNFSKTDVVPAAVIIPRTSSGAELGTGSRSYAADVAPVLSKASRRAEPATDPRTESA
DVAPAVVPRTSSRMEMASDSAPDAVSRVGRRLESAADSRKESADAAPVVPRATSRMEMAS
DSVPVLPKAGRRFESATDSRKESTDEAPVVVPRATSRMEMASDSRREPSAGRVSPFRIQS
RYAEPRKSTNVKVDMDKVDVGSKDTESDDLTCQIFLPRRNGAVQTVIPEETREDVKHGSV
YRSGFSGSAESNTSHRNDNYVPRMRKPRDNCYIEVSRAGRTRSIVSNWEGRDQSPSHEEP
TTSNSALGAPRGRIYSSRGSSQAAETNIVTSEEDVLSVLIEEHDLFLSSTRSRLTKLQIL
HQMWQRNDIRGVFSALEKMSDHAVCADMASVLMEKSEAITLDLCTTILPVLADLLESKTD
RHVAVSLELVVKLVRTFGPVIHSTVSVGPSSVGVDLEAEQRRERCNLCFIELEKVKNKLP
SLMRRKGAASNTAQELSLVFQEIMS
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaacaccaagcgcgcgtacaagctccaggagtttgtggcgcacgcctccaat
gtcaactgcctcaagattgggaggaagacatcgcgagtccttgtcactggaggagaggat
cataaggttaatctttgggctatcgggaagcccaattcgatatcgagtttaccagggcat
acaagtgctgtggagtcagttgcttttgattccacagaagtatttgtggctgcaggagca
gccagtggcacagtaaaattatgggatctagaggaggcgaagattgtccgcacgcttact
ggacatagatcaaactgtatgtcagttgatttccatccttttggggaattctttgcctct
gggtctttggacactaatctgaagatatgggatataagaaggaagggctgtatccacaca
tacaaaggccacaccagaggggtgaatgctattagattcacacctgatggccgttgggtt
gtgtctggcggtgaagatagtgcagtgaagatctgggatttgacagctggaaagttactg
catgagttcaaatctcatgagggtcaaattcagtgcattgatttccatccccatgagttc
cttctggcaacaggttcagctgataaaactgtcaagttctgggatttggagacctttgag
ttgattggatctactggacctgagatgacaggtgtacgatccatgacattcaatcccgac
ggaagatctctgttatgtgggctgcacgagagcttaaaggttttctcttgggaaccaata
agatgccatgatactgtagatgtgggatggtctagactatcggatctgaatgtccatgag
ggaaaacttcttggttgttcttctaatcagagttgtgttggaatatgggttgttgatcta
acgcgccttgagccacatgcaactagtacttcagcattacttaatggccgttctgaattg
aagacttcatcaggtggcactatgccattacaaaacgacagtggttcaagggctaacata
gggcgatcatcagctctacaaaattcagagaataacttaaaagcttctacaggaaggctc
tcagtttctcaaaattcagattctgcacccaaagagattaagccgacagctccaagtggc
ttggtcccaagcactcctcaaagggtcggaactggctccagtactagaacagctggaaat
tcaacttatgcatctggtggcaccacattaaagagaagttcactgaagagtaacagcact
tctaatcttcataatttcagtaaaactgacgtggtgcctgctgctgttatcatcccaaga
actagctcaggagcagagcttggtactggttcaagaagttatgctgctgatgtggcccct
gttctttcaaaggcaagcagaagggcagagccggctactgatcctaggacagaaagtgct
gatgtggcacctgctgttgttcccagaacaagttcaagaatggaaatggcctctgattca
gcacctgatgctgtttctagggtaggcagaaggttggaatctgctgctgattctaggaaa
gaaagtgctgatgcagcaccggtcgttcccagggctacttcaagaatggaaatggcctct
gattctgtacctgttcttccgaaggcaggcagaaggttcgagtctgctactgattcaaga
aaagaaagcactgatgaagcacctgttgttgttcctagagcaacttcaagaatggaaatg
gcctctgattctaggagagaaccttctgcaggaagagtatcaccatttaggatccaatca
aggtatgctgaaccaaggaaatcaaccaatgtgaaagttgatatggacaaagttgatgtg
ggaagcaaagatactgaaagtgacgaccttacttgtcaaatatttcttcctcggaggaat
ggtgctgttcaaacagtgattcccgaagaaactcgtgaagatgtaaaacatggttcagtt
tacaggtcgggattttcaggttcagcagaatcaaatacgagccaccggaatgataattat
gttcctagaatgcgtaagccaagagataactgctacattgaagtttcaagagcaggaaga
acaagatcaattgtttctaattgggaaggcagggatcagtccccaagtcacgaagaacca
acaacaagcaattcagcgttgggggctcctagaggccgaatatattcatctagaggaagc
agtcaagcagctgaaactaatatcgtaactagcgaggaagatgttttatctgttctaatc
gaagagcatgatctatttttgagttcaacacggtcacggctgacaaaattgcagattctg
caccaaatgtggcaaagaaatgacatcaggggtgttttctcagcgctggagaagatgtcc
gatcatgctgtatgtgctgatatggcaagtgttctgatggagaaaagcgaagccatcaca
ctagatttatgtaccactatcctgcctgtccttgctgaccttttggagagtaaaactgac
aggcatgtagctgtatcactggaactggtagtgaagcttgtcaggacttttgggcctgta
atacattcaacagtgtcggttggtccatcttctgttggtgtagatcttgaagcagagcaa
aggcgggagaggtgcaacttatgcttcatagaactggagaaagttaaaaataagcttcct
tcccttatgagaagaaaaggggcagcttcaaacacagcgcaggagctcagtcttgtcttc
caggaaattatgtcgtag
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