Triticum dicoccoides (wild emmer wheat): 119357639
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Entry
119357639 CDS
T07278
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119357639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdc03021
]
119357639
03036 Chromosome and associated proteins [BR:
tdc03036
]
119357639
Transcription machinery [BR:
tdc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119357639
Coactivators
SAGA/TFTC/STAGA complex
119357639
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
119357639
STAGA complex
119357639
TFTC complex
119357639
SAGA complex
119357639
SLIK complex
119357639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
119357639
NCBI-ProteinID:
XP_037480418
LinkDB
All DBs
Position
1A:complement(4947144..4953557)
Genome browser
AA seq
561 aa
AA seq
DB search
MSIVPKETIEVIAQSIGIPSLPADVSAALAPDVEYRLREIMQEAIKCMRHAKRTVLTADD
VDSALSLRNVEPVYGFASGDPLRFKRAVGHKDLFYIDDREVDFKEIIEAPLPKAPLDTAV
VAHWLAIEGVQPAIPENPPIDAISAPTENKRTEHAKDDGLPVDIKLPVKHILSRELQMYF
DKIAELTMSRSSTPVFREALVSLSKDSGLHPLVPYFSYFIADEVTRSLADLPVLFALMRV
VQSLLRNPHIHIEPYHITSKRATLVYCQLHQLMPSMITCIVAKRLGHRLSDNHWELRDFS
ANLVASVCRRYGHVYHNLQIRLTKTLVHAFLDPHKALTQHYGAVQGISALGPSAQIRLLL
LPNLQTYMQLLDPELQLEKQSNEMKRKEAWRVYGALLCAAGKCLYERLKLFPNLLSPPTR
PLLRSNSRVATNNPNKRKSSTDLSASQPPLKKMASDVSMSPMGSAAPVAGNMPGSMDGFS
AQLPNPSMMQASSSGQKVESMTAAGAIRRDQGNNHAQRVSTVLRQAWKEDQDAGHLLGSL
HEVFGEAIFSFIQPPELSIFL
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgtccccaaggagacgatcgaggtgattgcccagagcatcggcatcccctcc
ctccccgccgatgtctccgccgccctcgcccccgacgtcgagtaccgcctccgggagatc
atgcaggaggccatcaagtgtatgcggcatgcaaagaggacagttctgactgccgatgat
gttgacagtgctctgagcctgaggaatgttgagcctgtatatggatttgcatctggtgac
cccttgcggtttaagagagctgtgggccataaagatctcttctatattgatgacagggag
gtagacttcaaagagattatcgaagctcctctaccgaaagctccactcgacacagcagtt
gttgctcactggctagcgattgagggcgtccaacctgctattccagagaatcctcctatc
gatgcaatttcagcaccaactgaaaataaaaggacagagcatgcgaaggatgatggacta
ccagttgacatcaagcttcctgttaagcatatattatctagagaactccagatgtacttt
gataaaatagcagagcttactatgagtagatcaagcaccccagtttttagagaagcatta
gtgagcctgtctaaagactcaggccttcatccgttggttccttacttttcgtacttcatt
gcagatgaggttaccaggagtttggccgacctccctgttctatttgctctcatgcgtgtt
gtccaaagccttctccgtaatcctcacattcatattgaaccatatcatattacttctaaa
agggcaacacttgtttattgccagttgcatcagttgatgccatcaatgatcacttgcatc
gtcgcgaaaaggcttgggcacaggctttcagacaaccattgggagcttagagacttctct
gccaatttggttgcttcagtatgtcggaggtatggtcatgtgtaccacaatctccaaatc
cggttaacaaagacactggtccatgcatttcttgaccctcataaagcattgacgcaacat
tatggtgctgttcaagggatatctgcattggggcccagtgcgcagattaggcttctgctt
ttgcccaacctccagacgtacatgcaacttttggatcctgaattacaacttgagaagcaa
tcaaatgaaatgaaacgaaaggaagcatggcgtgtttacggtgccctgctgtgtgctgca
ggcaaatgcttgtatgagcggcttaagttatttcctaatttgctctctccgccaactcgg
ccacttttgaggagtaatagcagagttgcaacaaacaacccaaataaacggaagtctagt
acagacctgtctgcgtcccagccacctctgaagaagatggcgtcggacgtatcaatgagt
cccatgggttcagcagctccagtggcaggaaacatgccaggaagcatggacgggttctcc
gcccagctacccaaccccagcatgatgcaagcctcatcctccggacagaaggttgaaagc
atgacagcagcaggcgcgatccggagagaccagggaaacaaccacgcgcaaagggtctcc
acagtgctgaggcaggcctggaaggaggaccaagacgccgggcatctcctggggtcgctg
cacgaggtgttcggtgaagccatcttctcgttcatccagccaccggagctatccatcttc
ctgtag
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