Triticum dicoccoides (wild emmer wheat): 119357990
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Entry
119357990 CDS
T07278
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein MSH3
KO
K08736
DNA mismatch repair protein MSH3
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119357990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119357990
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
119357990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
119357990
NCBI-ProteinID:
XP_037480629
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All DBs
Position
2A:complement(601904176..601911137)
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AA seq
1031 aa
AA seq
DB search
MAKQPKQQAAVRRALLEPPPPGSNPSGGDGGGGGGRGYTPLEQQVADLKAHHPDVLLMVE
VGYRFRFFGEDAAVAASVLGIVAHPDRSFLTASVPTFRLGFHVRRLVDAGHKVGVVRQTE
TAAIKAAAAARGGGGAAPFARELSAVYTRATIEAGAGEMEGGGAPEEGSRYLVCVVDKEV
DAVGREGFEVKVGVVAIEVSTGEVVHGEFMDGASRSGLEAVLLGLAPVEVILGTPLSFST
EKLMRAYAGPASNVRVECTSRDCFSGGGALAELMSLFEKSEVNSPTIENDKQMMEINEED
NNLRGMEGVMAMPELVAQAMALSVRYLKGFGMQRLICFGSSFRPFTANTEMSLSANALQQ
LEVLKNNSDGSIEGSLFQTMNNTCTAFGSRLFRHWLTHPLSDRNLICARHDAISEISESM
GSRQDSVSIRQDEGDGCCAASARSDLSTILSSVLTMLGRSLDSQRGITRIFHCKATAKEF
VGVIXAILTAGKQLRKLVLEDTDNMSSQHRIVHSSLLRRLISTASSSAVLANAVKLLSCL
DKDAADQGDMINLFISSVDQFPEVAEGHVTVEMAKQKLDLLIVEYRKQLGMRSLEYKTVS
GTAYLIELPVDRRVPTNWMKVNSTKKTIRYHTPEVLKNLDNLLLAKEELAVICRKTWHKF
LMDFGKYYAQCQASVESLAALDCLYSLATLAKQNNYVQPNFVPEDEASQIHIKDGRHPVL
ESLLGDNFVQNDTDLHADGQYCQIVTGPNMGGKSCYIRQVALITIMAQVGSFVPASSAIL
HVVDGIYTRMGASDSIQQGTSTFYEEMNEASNILQNCSSRSLVIIDELGRGTSTHDGVAI
AYATLHYLLKNKKCIVIFVTHYPKILDIQSEFEGSVGAYHVSYLSTRKLLQISDEKMGIS
TETEDLGEITFLYKLVAGASDRSFGLNVALLAQLPLRCIQQASVMAAKLQEEMSKHDENK
LLRLMDEPSRDGPWESSPEVGLLCAEPHQGLMEACRRILHDMRSAQSNNDVTNTLSCLKS
AQEIASKMIKG
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcagccgaagcagcaggccgccgtccgccgcgcgctcctcgagccgccgccc
cccggctcgaaccctagcggcggcgatggcggtggcggcggcggcagaggctacaccccg
ctggagcagcaggtcgcggacctcaaggcccaccacccggacgtcctcctcatggtcgag
gtgggctaccgcttccgcttcttcggcgaggacgccgccgtcgccgcctccgtcctcggc
atcgtcgcccaccccgaccgcagcttcctcaccgccagcgtccccacgttccgcctgggc
ttccacgtccgccgcctcgtcgacgcgggccacaaggtcggcgtcgtccgccagaccgag
accgcggcgatcaaggcggccgcggctgcgcgcggcgggggcggcgcggcccccttcgcg
cgcgagctgtcggcggtgtacacgcgcgccaccatcgaggccggggccggggaaatggag
ggcggcggcgcgccggaagaggggagcaggtacctcgtctgcgtggtggacaaggaggtg
gatgccgtggggagggaggggttcgaggtgaaggttggggtggtggccatcgaggtgtcc
accggcgaggtcgtgcacggggagttcatggacggcgcatccaggagcgggcttgaggcc
gtgctgcttggcctggcgcccgttgaggtcatactcggcacccctctctcgttctctact
gaaaagctgatgagggcatatgcgggacctgcctctaatgtccgggttgagtgcacttcg
cgtgattgtttcagcgggggcggcgctttagcagaactgatgtctttgtttgagaaatcg
gaggtcaattcaccaaccatcgaaaacgataaacagatgatggaaataaatgaagaggac
aacaatcttcgtgggatggagggtgtcatggctatgccagagctagttgcccaagcaatg
gcattgagcgttcgctatttgaagggttttggtatgcagaggttaatctgctttggttcc
tcgttccggccatttactgctaatactgaaatgtctctatcagcaaacgctcttcagcag
ctcgaggtattaaagaacaactcagatggttcaatagaaggatccctgttccaaactatg
aacaacacatgtacagcttttggatctaggctgtttagacactggttgactcacccctta
tctgatagaaatctaatatgtgctcgtcacgatgcaatctctgagatctctgaatcgatg
ggatcacggcaagattcagttagcattcgacaggatgaaggggatgggtgctgcgcagct
tctgcgcgaagtgatctcagcaccattctttcatctgttttaacaatgctgggaagatca
cttgattctcaaagaggaattacaagaatttttcactgcaaagccacagctaaagagttt
gttggggtcatctaggctatcttgacggctggaaagcaactgcggaagcttgttctcgag
gatactgataacatgtcttctcagcatagaattgtccactcttctttgttgagaaggctc
ataagtacagcttcatcatctgctgtacttgctaatgctgtgaaacttctgtcgtgtctt
gacaaagatgctgctgatcaaggagatatgataaacctattcatttcatctgttgaccag
ttccccgaggttgcagagggtcatgtgactgttgaaatggccaaacaaaaactggattta
ttaattgttgaatatcggaagcagcttggcatgcgcagcttggagtacaaaaccgtatct
ggaacagcttacctgatcgaactaccagtagatagaagggtgcctacaaattggatgaaa
gtaaatagcaccaaaaaaactattagataccacactcctgaagtattgaagaacttggac
aacttattactggctaaagaagaactagcagttatctgcaggaaaacatggcacaaattc
cttatggatttcggcaaatattatgcgcagtgtcaagcatctgtcgaatctcttgcagct
cttgactgcttatactctcttgccactcttgcaaaacaaaataattatgtacaacctaac
tttgttcctgaagatgaagcaagtcagatccacatcaaagatggtcgccatccggttctg
gagtctctacttggagacaattttgttcaaaatgatacagaccttcatgcagatgggcag
tactgccagattgttacaggaccaaacatgggaggaaaaagttgctatattcgccaagtt
gcactaattaccattatggcccaggttggttcctttgtaccagcttcatcagcaatactt
catgttgttgatggaatttatactcggatgggtgcatctgacagtattcaacaaggaaca
agtaccttttatgaagagatgaatgaagcttccaacatattacagaactgctcatctcga
tccctagttatcattgatgagcttggtcgtggaacaagcacacacgatggtgttgctata
gcctatgctacattacactatctcctgaaaaacaagaaatgtattgtcatttttgtaact
cactatccaaagattcttgatatccagagtgaatttgaaggttccgttggggcataccat
gtttcatatctgtcgacaaggaagctgttgcaaattagtgatgaaaagatgggtattagc
acagaaacagaggatcttggagaaattactttcttgtataaacttgttgctggagcttca
gacagaagctttggtcttaatgtcgcactgcttgcgcagctcccgttgagatgtattcag
caggcatcggtcatggcagccaaactgcaagaagagatgagtaagcatgatgaaaacaag
ctgctgaggttaatggacgaaccatccagggatggaccatgggaaagctctcccgaagtt
ggtttgctttgtgcagagcctcaccaggggttgatggaagcatgccgcaggatactgcat
gacatgagatctgctcaaagtaataacgacgtaacaaatacactttcttgtttgaagagt
gcacaggagatcgcatcgaagatgattaaagggtag
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integrated database retrieval system
