Triticum dicoccoides (wild emmer wheat): 119359797
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Entry
119359797 CDS
T07278
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00040
Pentose and glucuronate interconversions
tdc01100
Metabolic pathways
Module
tdc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119359797
Enzymes [BR:
tdc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
119359797
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
119359797
NCBI-ProteinID:
XP_037481780
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Position
2A:665360387..665363216
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AA seq
402 aa
AA seq
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MGIIGIRTATLLLAALAWRSVLVAAAGEADGVFNVKDYGARGDGTTDDTKAFIDAWSAAC
GARGSSASLLLPAGKSFLVGPARFSGPCASTRITVQVMGTITAPPPGAWSGQKYWMMFYQ
VQGLTVTGGSTGLLDGRGRSWWWSDQCNRYGDIYKAPTALVVMNCTDVELSKFSSKNSPQ
MHIAVSQSSKVHLTQLTTTAPWDSPNTDGVHIDQSEDVRVTRSTMGTGGECVSIGPGSRF
VTVDGIVCGPGRAVSVGSLGKKGATESVEYIDVKNVHFINTLSGARIKTWQGGKGYARSI
SFTNINFTNVDNPVVINQFYADPYHVPNMGAVAVSNITYTNLKGTSRYRTAVEFVCSESR
SCTNIHVNSVAITFPYGEALALCQNAQGDTSGYVYPKIPCLR
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcatcggcatccgcacggccaccctgctcctcgctgccctcgcgtggcgtagt
gtgctcgttgccgccgccggcgaggcggacggcgtgttcaacgtcaaggactacggtgct
cgaggcgacggcaccacggacgacaccaaggcgttcatagacgcatggagcgcggcgtgc
ggcgccagaggctcgtcggcgtcgctgctcttaccggcgggcaagtccttcctcgtcggc
cccgccagattcagcgggccctgcgcctccaccagaattaccgtccaggtcatgggcacg
attacggcgccaccgccgggcgcatggagcgggcagaaatattggatgatgttctaccag
gtccaggggctcacggttaccggcggcagcaccggcttgctcgacggcagaggccggtcg
tggtggtggagcgatcaatgcaaccgctacggtgacatatataaggcgccgacggccttg
gtggtcatgaactgcaccgacgtggagctgagcaaattcagcagcaagaacagcccgcag
atgcatattgccgtcagccagagcagcaaggtccacctgacgcagctgaccaccaccgcg
ccctgggacagccccaacaccgacggcgtgcacatcgaccagagcgaagacgtccgcgtc
accagatcgaccatgggcaccggcggcgaatgcgtctccatcggccccgggagccgattc
gtcaccgtggacggaatcgtctgcggccccggccgtgctgtaagtgtggggagccttggc
aagaagggagcaaccgaatccgtggagtacatcgacgtaaaaaacgtccacttcatcaat
accttgagtggagcaaggatcaagacgtggcagggtgggaaaggttacgcgagatccatc
tccttcaccaacataaacttcaccaacgtggacaatcctgtggtcatcaaccagttctac
gcagacccctaccacgtcccaaacatgggggcggtggcggtgagcaacataacgtacacg
aacctcaaggggacttcgaggtacaggacggccgtcgagttcgtctgcagcgagagccgc
agctgcaccaacatccacgtcaactccgtggcgatcacatttccgtacggagaagccctg
gccctctgccagaacgcgcaaggggacacctccggatatgtctaccccaagatcccttgc
cttagataa
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