Triticum dicoccoides (wild emmer wheat): 119360438
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Entry
119360438 CDS
T07278
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic-like
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tdc01009
]
119360438
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdc04131
]
119360438
Protein phosphatases and associated proteins [BR:
tdc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119360438
Membrane trafficking [BR:
tdc04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
119360438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Syndetin_C
Vps54_N
DUF7791
Motif
Other DBs
NCBI-GeneID:
119360438
NCBI-ProteinID:
XP_037481974
LinkDB
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Position
2B:57743247..57756145
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AA seq
964 aa
AA seq
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GGAPQSITSLLNNPLPSASAGSYWLPWPPPAAPPEAPPPPSHPCEVSRADFAPYLARVAD
PFARFADVRLHATAELALAASDDGAPAAASPSSGLAACLREVPALFFKEDFALEEGATFE
AACPLAEPALQERLGQHLDVVEAHLVQEIARRSESFYEAQGRLRGLDGEIVAAVGRIREL
REVVRVLTGDLVGDAQQVQELNATRGNLVALQEKLTIILYVSQALAALKLLVLAADCAGA
LDVIDDLQNLIDTDELAGLYCFRHIRDQLGTSLDSVNSILSAEFVRAAVPDGKTVDAMVL
STVKRKTSTPLNGTDHEVNVDEEDGFILRDRLLPLIICLLRTDKVPAVLRMYRDTLITVM
KASIKSTVAEMLPVLISKPIDSDSVTGDRAADSDAGGQSLANKLRSLSSEGFVQLLSAIF
SIVQVHLQQAAEVKKIVQWIMRNLDGNISPDDTNPVVQHGGSVDLPQEKDYDVTSRVSNT
VTRTPTKLPLFQGKTNDMSSINSIKNIRADVLRESTEAVFAACDAAHGRWAKLLGVRAAL
HPKLRLQEFLIIYNITEEFIAATEKVGGRLGYNIRGILQQQSKQFVEYQHSVRMAKIKAV
LDQETWIAVDVPEEFQVIVLSLSSTDFPVNGMEMPSNDNNSKLSEDGVSTSQESAHSTEN
NVENSNGTSTTSNENKVESTSQTENSVAGHVRPVSQTIVLGGVGYHMVNCGLILLKMLSE
YVDISKCLPSLSFEVVQRVVEILKHFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQII
SFIHSLIPDIRRVLFLKIPEARKHLLMSELDRVTQDYKVHRDEIHTKLVQIMRERLLANL
RKLPQIVESWNGPDDNDSQPSLFAKAVTKEVTYLHRILSQILLEVDLQAIFRQVVQIFHS
HITEAFSKLEVSSPQAKNRLCRDVQHILVCIRKLPAQNFSSEPVRNYGLLDEFLAEKFGT
KVDE
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
ggcggcgccccgcagtccatcacctcgctcctcaacaacccgctcccctcggcctccgcg
ggctcctactggctcccgtggcccccgccggccgcgcccccggaggccccgcccccgccc
tcccacccctgcgaagtctcccgcgccgacttcgcgccctacctcgcccgcgtcgccgat
cccttcgcgcgcttcgccgacgtccgcctccacgcgaccgccgagctcgccctcgccgcc
tccgacgacggcgccccggccgccgcctccccgtcctccggcctcgccgcatgcctccgc
gaggtccccgcgctcttcttcaaggaggacttcgcgctcgaggagggggccaccttcgag
gccgcctgcccgctcgccgagcccgccctgcaggagcgcctcggccagcacctggacgtc
gtcgaggcgcacctcgtgcaggagatcgcgcgccgctccgagtccttctacgaggcccag
ggccggctccgcggcctcgacggggagatcgtcgccgccgtcgggaggatccgggagctc
agggaggtcgtccgggtgctcacgggcgacctcgtcggggacgcccagcaggtgcaggag
ctcaatgccacccgggggaacctcgtcgcgttgcaggagaagctcaccatcatcctctat
gtcagtcaggctctggcagccctcaagctgctagtgctagcggcagattgtgctggtgcg
cttgatgtcattgatgacttgcaaaatctcatagacactgatgaacttgctgggctttat
tgctttcgacatattcgtgatcagttgggaacatcattagattcagtgaacagcattctt
tcagcagagtttgtacgggctgctgttcctgatggaaaaactgtcgatgcgatggtttta
tcaactgtgaaaaggaagacttctactcccctcaatgggactgatcatgaagtaaacgtt
gatgaggaggatggcttcatcctcagagatcgtcttctccccctcattatttgcctgctg
agaacggacaaagttcctgcagtgctcagaatgtaccgggatacccttattactgttatg
aaagcttcaatcaaatccacagttgctgagatgcttccagtcttgatttccaaaccaata
gattctgattcagtaactggggacagagctgccgattctgatgctggaggccagtcttta
gcaaataaactgcgtagtctatcatctgaaggttttgttcagcttttatcggctattttt
agtatagttcaggtacatctacagcaagcagctgaagttaaaaaaatagttcagtggatc
atgcgaaaccttgatgggaacataagtcctgatgacacaaatcctgtcgtacaacatggt
ggctcagttgatcttccccaagagaaagactatgatgttacttcacgggtctctaatact
gttacacgcactcctactaagcttccgttgtttcaaggaaagacaaatgatatgtccagt
ataaattcaataaaaaatattcgagctgatgtgttgagagaaagcacagaagcagtgttt
gctgcatgtgatgctgcacatggacgatgggctaagctgctaggtgttcgtgctgctcta
catcccaagttaaggcttcaggagttcctgatcatctataatataacagaagaatttata
gctgctacagaaaaggttggaggcaggttaggttacaacattcgcggaattctacagcaa
cagtcaaagcaatttgttgagtatcagcatagtgttcggatggcaaaaattaaggcagtt
cttgaccaagagacatggatcgctgttgatgttcctgaagagttccaagtgattgttctg
tcactgtcatcaactgactttcctgttaatggcatggagatgcctagcaatgataacaac
tcaaagctcagtgaggatggggtttcaacaagtcaagaatcagcacattcaactgaaaat
aatgttgaaaatagcaatggaacatcaacgacaagcaatgaaaacaaggttgaatccact
tctcagactgaaaatagtgttgctggccatgttaggccagtctcgcaaaccattgtgctt
ggaggtgttggctatcatatggtgaactgcggtctgatattgttgaaaatgctatcagaa
tatgttgacatcagtaaatgtttgccatcgttatcttttgaggtggtccaacgtgttgtt
gagatattaaagcatttcaataccaggacttgccaactggttcttggcgcaggtgccatg
caggtatctggtctgaaatcaattacttctaagcatttagctttagcaagtcaaattatc
agtttcatacattctttgattccagatattcgtcgagtacttttcctgaaaataccggaa
gcacgtaaacatctgttgatgtctgaactggatagagttactcaggactataaggttcat
cgagatgaaattcacaccaagctagtccagataatgagagagagattgctagcaaatctt
agaaaattaccgcaaatcgtggaaagttggaatggaccagatgataatgattctcagcca
agtctattcgccaaagctgttacaaaggaagtcacttacttgcatcgcatcctctctcaa
atactgcttgaggtagatctgcaagcaatattcaggcaagtagtccagatattccattcc
catattacagaagcattttcgaagttggaagtcagtagtcctcaggcaaagaacagatta
tgtcgagatgttcagcacattcttgtatgtattcgaaagttgcctgctcagaacttcagc
tcagaacctgttcgaaattatggtcttcttgacgagttcttggctgagaagttcgggaca
aaagttgacgagtga
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