Triticum dicoccoides (wild emmer wheat): 119360518
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Entry
119360518 CDS
T07278
Name
(RefSeq) SNF2 domain-containing protein CLASSY 2-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119360518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119360518
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
119360518
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SAWADEE
Motif
Other DBs
NCBI-GeneID:
119360518
NCBI-ProteinID:
XP_037482020
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All DBs
Position
2B:complement(79992081..79997036)
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AA seq
1201 aa
AA seq
DB search
MAEDTLKGGPKGRRSHPISETPFEAFYDGSWHEVNCIRVRNGGLFVKFYSGSTVEHNVDG
DHLRLRSRRATYFDCSHVLKPGVDICVQSSHPLQGNPTGEMKFSMLLCHDARLITIKRNH
IEDQCLCLFVVMLRKNLCPDNTENRKVISDRKEQVVTLKNIFLLQKLQPEELHEGSIQWS
CAEDCLSHNRSKLLSARFSQEIAHLIVLSILNGMEFTIKLVEGNIIYRIIKGGRASCNLD
SMSTPPGFGNNMEIISFQLRNEALRPIIRNIPVTHPKKHNLTEDMRFTMKAELDGQLEDR
RFTVKTELDGLLDVFSYEEVDLRRSKRRKTQAERFTSYETPNFGRDRWKRCDAPSTKHGN
SQRASRRDSPVAVESTYGEVPVNITRKQTSATAFVVKENPNSAEGKHKSTARITPVKGKP
SSVEVKEESTVEERSPGPHVPRTPAKSKERNLRPLLSLRRKSFTSSRSLNGNSEPAFGRK
RKERMCEREYKKMINQCIGNIQSEMERDFEFNLGVPMMNYGQGFYGEVNFTWPASADNDS
QEEKDGLEEFWKEMDHSLTTLALEKNQANCNGYNKERPGCRNIDHDDLVLDPSLLAILGP
EFSELKGSGNLWSLIPDLEPKLLPHQRNAFEFIWKNLAGSLQLEEMDNPTASTGGCVVAH
TPGSGKTLLLISFLVSYLKVHPRSRPLVLTPKSAIHTWMREFEKWGISLPLHVLHQADKR
GKPMGPIDPRLQAILSNFRRPNWKNICLVDRMDKLCKWHEHPSVLLMTYSSFLRLAKEDS
RMPQRAFMVQVLINNPGLLILDEGHNPRSNKSKLRRVLMKVKTEFRILMSGTVFQNNFEE
YFNTLSLARPRFVDDVMTVLVPERKKETRGRRAKHREAVARRIFVDRVGQMIESSDNWDR
QGGISLLNKLTCGFIDSFEGSKLRSLPGIHVYTLFMKPTEIQEDILSRISMATSCGGRYL
LEVELLITIASIHPWLIKTTKSSSTYFTPEELHKVDKYKRDFVVGCKAKFLIDLLHKSSY
RGERVLIFCHNVSPISFLVELIENVFGWRLGEEVLVLQGDQELPVRSDVMDKFNTDSQGK
RKVLIASTTACAEGISLTGASRLVMLDSEWNHSKTRQAIARAFRPGQERTVYVYLLVASG
TWEEDKYSRNRRKAWMAKMVFHGRYFDDPLRKAVTDFNDDILKELADEDKTKTFHMIVKQ
D
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagatacgctcaagggaggacctaaaggtcgccgtagccatcccatcagtgaa
actccatttgaggcattttatgatggctcgtggcatgaagttaattgtataagggtcagg
aatggcggtctattcgttaaattctactctggttccacagtcgagcataacgttgatggg
gatcatctgcgcctacgctccagaagggctacgtactttgactgctcgcatgttctcaag
ccgggtgttgatatctgtgtacaatcatctcatccactgcaaggaaatccaactggggaa
atgaaattttcgatgttactgtgtcatgatgcaaggctcatcacaatcaagagaaatcat
attgaagatcagtgtctctgcctgtttgttgttatgctccgcaagaacctatgtcctgac
aatacagaaaatagaaaagtgatatctgatagaaaagaacaggtggtgaccctaaagaat
atcttcctcttgcaaaagctccaacctgaggagctccatgagggaagcatacaatggagt
tgtgcagaggactgcctgtctcacaatagaagcaagctgttaagtgcaagattctcccaa
gaaattgcacatctcatagttttgtctatcctgaatggaatggagttcaccatcaagttg
gtagaaggcaatatcatctatagaatcatcaaaggaggccgagcgagttgcaatcttgat
tccatgagcacacctccaggctttggcaacaacatggagataatttcattccaactgcgc
aatgaggctttacgcccaattatcaggaatatccctgtcactcatccaaagaagcacaat
ctcacagaagacatgagattcactatgaaggctgaattggatggtcaattggaagacagg
agatttacggtcaagactgagttggatggtctattggatgttttctcgtatgaagaagtg
gatttgaggcgctcaaagcgtcggaaaactcaagcagagcgctttactagctatgaaacg
cctaatttcggtcgtgacaggtggaagagatgtgatgcgccttccaccaagcatggcaat
tcacaaagagcttcacgtcgagattcaccagttgcagtagaatcaacctatggagaggtc
ccagtgaatatcacacggaaacaaacaagtgcaaccgctttcgtggtcaaggaaaaccca
aactccgcagaagggaagcataagagcacagcaaggataactcctgtcaagggaaaaccc
agctctgtggaggttaaggaggagagcacagttgaagaaagatctccgggtcctcatgtt
ccacggacacctgcaaagagtaaggagaggaatcttcgcccccttttatctcttcgacgg
aagtcatttacttcatcccgcagcctaaatggcaattctgagccagcatttggtcggaaa
aggaaggaacgcatgtgcgaaagagaatacaagaaaatgataaaccaatgcataggaaac
atccagagtgaaatggagagggactttgagttcaatctaggtgttccgatgatgaattac
ggtcaaggtttttatggagaagtgaattttacatggccagcttctgctgataatgacagt
caagaagagaaagatggtcttgaggaattttggaaagaaatggatcactcattgaccaca
ctagcgcttgagaaaaatcaggccaattgtaatggctataacaaggagagacctggatgc
cgcaatattgatcatgatgatcttgtacttgatccttctcttcttgcaatcttgggacca
gagttttcagaactgaagggctccgggaacctgtggagtttaatacccgatcttgagcct
aaactacttcctcaccaaaggaatgcatttgaattcatttggaaaaacttggcgggatcg
ctgcaactcgaggaaatggataatccaacagccagtactggtggctgtgtggttgcacat
actcctggatcagggaaaactctgctgctgatctcatttcttgtcagttacttgaaagtt
cacccgagaagccggccattggtgcttactccaaaatctgctatccatacatggatgagg
gaatttgagaaatggggcatttcacttcctctgcatgtgcttcaccaggctgacaaaaga
ggcaagccaatggggcctattgatcctaggctgcaggcaattttaagcaattttcgccga
cccaactggaaaaatatttgccttgtggatcgtatggacaagttatgcaagtggcatgag
catccaagtgttcttttgatgacatactcatctttcttacggctggcgaaagaagactca
agaatgccgcagcgagcattcatggtgcaagtcctgatcaacaaccctgggctgttgatc
cttgatgaggggcacaacccgaggagcaacaaatccaagttgaggagggtgctgatgaag
gtgaagactgagtttagaatcctcatgtctggtacggtcttccagaataactttgaagag
tatttcaacaccctatctctggccagacctcggtttgtggacgatgttatgaccgtgctt
gtcccagaaaggaagaaggaaacgaggggcaggagagctaaacatagagaagcagtggca
aggcgcatctttgtggacagagttgggcaaatgattgagtccagcgacaactgggaccgg
caaggtggtatcagtttgttaaacaagcttacatgtgggttcatcgattcattcgaaggg
tcaaagctaaggagccttccagggatacatgtatatacacttttcatgaaacccactgaa
atccaggaggatatactttcaagaatatcgatggccacgtcatgcggtggccgttacctt
ctcgaggttgagctgctcatcacgattgcgtctatccatccatggctcataaaaaccacc
aaatcttctagcacttacttcactccagaagaattgcataaagttgacaagtacaagagg
gactttgttgtcggttgcaaggcgaagtttctcatcgatctgctgcacaagtcgtcgtac
aggggggaaagggtgctgatattctgccacaacgtgtcgccaataagctttcttgtggag
ttgatcgagaatgtgttcggatggcgcctcggggaggaagtcctggtgctccaaggtgat
caggagctgcctgtccgctccgacgtcatggacaaattcaatactgacagtcaaggtaag
aggaaggtgctcattgcttcgacgacggcctgcgccgagggaatcagcttgacaggcgca
tcgaggttggtcatgctggattcagaatggaaccactccaagaccaggcaggcgatcgcg
cgggcgttcaggcccggccaggagaggaccgtgtatgtctaccttctggtggcatctggt
acatgggaggaggacaagtacagccgcaacaggaggaaggcttggatggcgaagatggtc
ttccacggacgctattttgatgatccgctacggaaagcggtgactgattttaatgatgac
attctcaaggagcttgctgatgaagacaagaccaaaaccttccatatgatagttaagcag
gactga
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integrated database retrieval system
