Triticum dicoccoides (wild emmer wheat): 119361733
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Entry
119361733 CDS
T07278
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00040
Pentose and glucuronate interconversions
tdc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119361733
Enzymes [BR:
tdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
119361733
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Peptidase_C24
Motif
Other DBs
NCBI-GeneID:
119361733
NCBI-ProteinID:
XP_037482760
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Position
2B:complement(10584112..10589711)
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AA seq
470 aa
AA seq
DB search
MAEQAGARRRRWAAALGAVSVLLLLLAALSSSGVAGLSGARLRSGGTAASTASGARRWLR
DSTSRLTTTATATARGERADDHADGSAVAVEDPEAVVSQVHMSIRNSTARRNLGYLSCGT
GNPIDDCWRCDSDWHNNRQRLADCGIGFGRNAIGGRDGKIYVVTDAGDDDPVNPKKGTLR
HAVIQDEPLWIVFKRDMVITLSQELIMNSFKTIDGRGANVHIANGACITIQYVTNVIIHG
LHIHDCRPTGNAMVRSSPSHYGWRTMADGDAVSIFGASHVWVDHCSLSNCADGLVDAIMG
STAITVSNNYFTHHNEVMLLGHSDSYLKDKAMQVTIAFNHFGEGLIQRMPRCRHGYFHVV
NNDYTHWEMYAIGGSAEPTINSQGNRYLAPTNPFAKEVTKRVETAQTTWKAWNWRSEGDM
LLNGAFFTPSGAGASASYSRASSLGAKSSSMVATITSGAGALSCHKGSSC
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcaagcgggtgccaggaggaggaggtgggccgccgcgctcggggccgtctcc
gtgctcctcctcctcctcgccgccctctccagcagcggcgtcgcggggctctccggcgcc
aggctccggtccggcggcacggccgcgtcgacggcgagcggcgcgaggcggtggctgcgg
gactcgacatcacggctcacgacgacggcgacggcaacagcgaggggcgaacgtgccgac
gatcacgccgacggttcagcggtggcggtggaggacccggaagcggtggtctcgcaagtg
cacatgtcgatcaggaacagcaccgcccggaggaacctcgggtacctgtcgtgcgggacc
gggaaccccatcgacgactgctggcgctgcgactcggactggcacaacaaccggcagcgc
ctggccgactgcggcatcggcttcggccgcaacgccatcggcggccgcgacggcaagatc
tacgtggtcaccgacgcgggcgacgacgaccccgtgaaccccaagaagggcaccctgcgg
cacgccgtcatccaggacgagccgctgtggatcgtcttcaagcgcgacatggtcatcaca
ctcagccaggagctcatcatgaacagcttcaagaccatcgacggccgcggcgccaacgtg
cacatcgccaacggcgcatgcatcaccatccagtacgtcaccaacgtcatcatccatggt
ctccacatccacgactgccgccccaccggcaacgccatggtgcgcagctcgcccagccac
tacgggtggcgcaccatggccgacggggacgccgtctccatcttcggcgccagccacgtc
tgggtcgaccactgctccctctccaactgcgccgacggcctcgtcgacgccatcatgggc
tccaccgccatcactgtctccaacaactacttcacccaccacaatgaggtgatgctcctg
ggtcacagtgactcctacctcaaggacaaggcaatgcaggtcacaattgctttcaaccat
ttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttccatgtggtg
aacaatgactacacccactgggagatgtacgccatcggagggagcgccgagccgaccatc
aacagccaggggaaccgctacctcgcgccaaccaaccctttcgccaaggaggtgacaaag
agagtcgagaccgcccagaccacgtggaaggcctggaactggaggtcagagggcgacatg
ctgctgaacggcgccttcttcaccccgtcgggagcaggcgcgtcagccagctactcgcgc
gcctccagcctcggcgccaagtcctcatccatggtcgccaccatcacctccggcgcgggc
gccctgtcctgccacaagggctcctcctgctag
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