Triticum dicoccoides (wild emmer wheat): 119362056
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Entry
119362056 CDS
T07278
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 1-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119362056
Enzymes [BR:
tdc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119362056
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119362056
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
PHD
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
119362056
NCBI-ProteinID:
XP_037483124
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Position
2B:48592199..48595721
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AA seq
281 aa
AA seq
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MSPRRRPPLLLLAAVAVACACAAARPCAALVRLGAASFLDAPARFGPRVTGDGICGSLRA
AEPADACAPVRGAPGGSGGMAFVLIARGNCSFEGKVRAAQRAGFDAALVHDDEDKASLYS
MVGDPEGIHIPAVFVSKMAGETLKKFARGEDGECCINSSMDETAGTVLVMSFVSLVVIIS
VVASFLFARNCRLLRNGVDNRPPYIKKHVVEKLPSVVYKAPCSSGNNCEEACAICLEDYD
NGDMLRLLPCKHEFHVECIDPWLTKWGTFCPVCKLEVLTGG
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgagcccccgccgccgtcccccgctgctcctcctcgccgccgtcgccgtcgcctgcgcc
tgcgccgccgcccgcccctgcgcggccctcgtccgcctcggcgccgcctccttcctcgac
gcccccgcgcgcttcgggccccgggtgaccggcgacgggatatgcgggtcgctgcgcgcc
gcggagcccgccgacgcgtgcgcgcccgtccggggcgcccccggcgggagcggcgggatg
gcgttcgtgctcatcgcgcgcgggaactgcagcttcgagggcaaggtgcgggcggcgcag
cgggccggcttcgacgccgcgctcgtccacgacgacgaggacaaggccagcctctactcc
atggttggcgatcctgagggcatacacatacctgcggtattcgtatccaaaatggctggg
gaaaccttgaagaagtttgccagaggtgaagatggggaatgctgtataaactcgtcgatg
gatgagactgcagggacagtgttggtgatgtcgttcgtatcacttgttgtcatcatatca
gttgtagcttcatttcttttcgctcggaactgccgacttttacgcaatggagttgataat
cgcccaccttacatcaagaagcatgtggtggaaaagcttccttctgtggtatataaagct
ccctgctcaagtggcaacaattgtgaagaagcctgtgccatttgtttagaagactatgat
aatggtgacatgcttagacttctcccatgcaaacatgagtttcatgtggagtgtattgat
ccctggctgacaaagtggggcacattttgcccggtatgcaaacttgaggtactcacaggt
ggataa
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