Triticum dicoccoides (wild emmer wheat): 119362378
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Entry
119362378 CDS
T07278
Name
(RefSeq) exosome complex component RRP41 homolog
KO
K11600
exosome complex component RRP41
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119362378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119362378
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119362378
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
119362378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
119362378
NCBI-ProteinID:
XP_037483479
LinkDB
All DBs
Position
2B:105381296..105384599
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AA seq
242 aa
AA seq
DB search
MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVSRADGSALFEMGNTRVIAAVYGPREIQNRS
QQQNSKEALVRCEYRMAEFSTGDRRRKPKGDRRSTEISLVIRQTMEASILTHLMPHSQID
IFVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLCSTPLLDLNYIEDSAGG
ADVTVGILAKMDKVTLLQMDAKLPMDTFETVMDLATEGCKAIATYIREVLLENTKQLECQ
RG
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atggagtacgtcaaccctctcacgggcttccgcgtcgacggccgccgccccaacgagatg
cggcagctcaagggcgaggtcggcgtcgtctccagggccgacggctcggcgctcttcgag
atgggcaacaccagggtcatcgccgctgtctacgggccccgagagatccaaaacaggagt
cagcaacaaaacagtaaagaggctttggtgcgttgtgagtatagaatggcagaatttagc
actggggatcgaaggagaaagccaaaaggtgacaggcgatcaacagaaatttctcttgtt
attcgacaaacaatggaggcaagcatattaacacatttaatgccacactcacagattgac
atatttgtccaagttcttcaagctgatggtggaaccaggtctgcatgcatcaatgctgca
actctagcacttgcagatgctgggattccaatgcgagacatagtcacttcttgcagtgct
gggtatctgtgttctactcctttgcttgatctgaattatatagaagacagcgctggaggc
gcggatgtcactgttggcattcttgcaaagatggacaaagtgactcttctgcagatggac
gcgaaactaccaatggatacatttgagactgtgatggaccttgcaactgaagggtgcaaa
gccatcgcaacctacatccgagaggtgctattggagaacacgaagcagctggagtgtcag
cgaggctag
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