Triticum dicoccoides (wild emmer wheat): 119362707
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Entry
119362707 CDS
T07278
Name
(RefSeq) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119362707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119362707
03036 Chromosome and associated proteins [BR:
tdc03036
]
119362707
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119362707
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119362707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
119362707
NCBI-ProteinID:
XP_037483853
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All DBs
Position
1A:58839010..58845215
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AA seq
661 aa
AA seq
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MMGSSSWSTPPPAFGPVKGSSSSLFSTPTSGAAMGSSPSLFCFTPASGAATGSSPYSFGV
MPTSGAAMGPPSSSFTPVATGFSPYSFGIMPASGAATGPSSSSFGSTPVATGFFPSSSGF
TPASGAAMGSYSSWCGPAFGRSPNAFGHPMPHQAPFSSNTPFGSTTGQHYSHVPTFGVQS
EPSFGPFGRVSKKGSRVSAYTRTPGDDPERNYYVSISAMPVFKSKSHEELRHADYKKGDK
GGFNLQEGRVPWAYHSSQPQPQAPVNAFANPVKPSLFSYSPEPSSAPVGLQSSAHGTTNP
FWLRPPGPQSPLFSYPPEPIHKPSWFSSSSCAPSTTCWENVSNNTAACTAPADTSSAQGH
MFSQNLFPSKSTQSGGSLLSSSVAHSAPAPSPNGHSTTINIDQAEKTVELVLPVDITTVR
IRFSPRNDDTGSRATEVHHNVKASATPVSFCIYPGENQELTIQSVEQHDRKPSSSTGSAG
EQKGYINGAVLARSNPFDPVITPFGGAPVSESVLPRLYKADYYTSPSIAELAARESNEPG
CCSHVKDFTVGRHGYGSIKFDGETDVRKLDIASIVEFKDREILVYTDESKRPPVGQELNK
PAEITLLNVKCVDKKTGLQLTEGPEVDRYKEILAQWTEKNGAEFVAFDAVKGEWKFRIKH
F
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgatgggttcttcatcttggtctacccctccgccagcctttgggccagtcaagggctct
tcatcatcattgttctccacgccgacctctggtgcggccatgggctcttctccatccttg
ttttgtttcacgccggcatctggtgcagccacgggctcttctccatactcgtttggtgta
atgccgacctctggtgcagccatgggccctccttcatcctcgttcacgccggtagccacg
ggcttttctccatactcgtttggtatcatgccagcctctggtgctgccacgggcccttct
tcatcctcgtttggttccacgccggtagccacgggcttttttccatcctcgtctggtttc
acgccagcctctggtgctgccatgggctcctattcatcttggtgtggcccagcatttggg
cgatcccctaatgccttcgggcaccccatgccccatcaggcacctttttcatccaacaca
ccatttggctctacaacaggccaacattattcacatgttcctacctttggggtgcaatct
gagccttcatttgggccctttggccgagtgtctaaaaaaggcagcagggtttctgcttat
accaggactcctggtgatgatcctgaacgtaattactatgtatctatttcagcaatgcca
gtattcaagagcaaatctcatgaggagcttcgacatgcagattataagaaaggagacaaa
ggtggtttcaacttacaggagggcagagttccttgggcttatcattcctcgcagccccag
ccccaggccccagtgaatgccttcgcaaatcctgtcaagccatcattgttttcatactct
cctgagccatcctcagcacctgtgggactgcaatcctcagcacatggtaccaccaaccca
ttttggctgcgccctccaggaccccagtcaccattattctcataccctcccgagccaatc
cacaagccatcatggttttcaagctcatcttgtgcaccatctactacatgttgggaaaac
gtatccaataacacagcagcatgtacagctcctgcagatacatcttctgctcaaggccat
atgtttagccaaaatttgttcccttcaaaatctactcaatctggaggaagtttactcagc
tcttcggtcgcccattcagcaccagctccatcgccaaacggtcattccactactataaat
attgatcaagctgagaaaactgtggagttggtactaccagttgacattactactgtaagg
attagattttctccaaggaatgatgatactggcagtcgtgctacagaggttcatcataat
gttaaagcttcagcaacaccagtgtctttctgtatctatcctggagagaaccaagagcta
actatccaatcagtggagcagcatgacaggaaaccatctagttcaacaggatccgctggg
gaacagaaagggtatatcaacggtgctgtcctggctaggagtaatccatttgatcctgtg
ataactccatttggtggtgcccctgtgagtgaaagtgtgcttcctcggctctataaggca
gactattacacctcgccgtctatcgcagagcttgctgcacgagaaagcaacgagccaggt
tgttgctcacatgtgaaggacttcacggtcggcaggcatggctatggcagcatcaagttt
gatggagaaaccgatgtgaggaagctcgacatcgcttccatcgtagagttcaaggaccgc
gagatcctggtctacacagatgagagcaagagacctcctgtggggcaggagctcaacaag
cctgcagagatcaccctcctgaatgtgaaatgcgtcgataagaagaccgggttgcagttg
acggaaggtccagaagtcgacaggtataaggagattctggcgcaatggaccgagaagaat
ggcgctgaattcgtggcgtttgatgccgtgaagggggagtggaagttcaggatcaagcac
ttttag
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