Triticum dicoccoides (wild emmer wheat): 119363180
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Entry
119363180 CDS
T07278
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119363180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119363180
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
119363180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
119363180
NCBI-ProteinID:
XP_037484388
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Position
2B:220565781..220570492
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AA seq
471 aa
AA seq
DB search
MEADSGKLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRNTGRARGFGFIVFAEAGVA
ERVTMDKHMIDGRMVEAKKAVPRDDQSIASKNNGSSIGSPGPVRTRKIFVGGLASNVTEV
EFRRYFEQFGMITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKR
AVPKEQSPGPVARSPAGGQNLAISRVHNFLNGFNQGYSPNPIGGYGMRVDGRFGLLSGAR
NGFSSFGPSYGMGMNVETGMNANFGANSSFLNNSNGRQMGSYYNGGSNRLGSPIGYVGLN
DDSGSILSSMGRNVWGNGNVNYQNSPTNMSSFVPSGSGSQVGITGDGINWGGPTSAHGMG
SISSLGSNISRGAGDNFGLPSGGYGRSNPTGTIGEPFSASANAYEMNNIDTYGNNSIYGD
STWRFTSSEIDIPPFDNDLGNIDPDIKSNMPASYMGNYTVNNNQTSRGITS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgactccgggaagctcttcgtcggcggcatctcctgggagacggacgaggac
cgcctccgcgaatactttggccgcttcggcgaggtcaccgaggctgtcatcatgcgggac
cgcaacaccggccgcgcgcgcggcttcggcttcatagtcttcgctgaggcaggcgtcgct
gagcgagtcaccatggacaagcacatgatcgatggccgcatggtcgaagccaagaaagct
gttcccagggacgaccagagcattgcaagcaagaacaatggcagcagcataggctcgcct
gggccagtccgtaccagaaagatctttgttggggggctggcctccaatgttactgaggtt
gaattcagaaggtattttgagcaattcggtatgataacagatgtggttgtcatgtacgac
cacaacacacagaggcccaggggctttggcttcatcacctatgattcagaagatgcagtg
gataaggcgctgcacaagaacttccacgagcttaatggcaagatggtcgaagtcaagaga
gctgtcccaaaggagcagtcgcctggacctgtcgcacgctcacctgctggagggcagaac
cttgctatcagcagggttcacaacttcttgaatggcttcaaccagggatatagcccaaac
ccgataggaggttacggcatgagagtggatggaaggtttgggctgctttcaggtgcacga
aatgggttttcttcatttggccccagttatggaatgggcatgaatgttgaaactgggatg
aatgcgaattttggtgcaaactctagtttcctcaataactcaaatgggcggcaaatgggt
tcatactacaatggtggttcaaacagactaggcagccctattgggtatgttggtctgaat
gatgattcaggatcaatattgagttcaatgggaaggaatgtttggggtaatggaaatgtc
aactaccagaacagccctacaaacatgagttcttttgtaccatctggaagtgggagtcaa
gttggtattactggcgacggtataaattggggaggtcctacttctgcccatgggatggga
agcatttcaagccttgggtctaacattagccgtggggctggagataactttggcttgccg
tctggtggctatggaaggagcaacccaactggcaccattggtgaacctttttctgcgtca
gccaatgcatatgaaatgaacaacatagatacatatggcaacaactctatttatggtgac
tcaacctggaggttcacgtcatctgagatcgatattcctccttttgataacgatcttgga
aatatcgatccagatatcaaatcgaacatgccagcaagttacatgggcaactatactgtt
aataataatcagacaagcagaggtatcacttcctag
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