Triticum dicoccoides (wild emmer wheat): 119363209
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Entry
119363209 CDS
T07278
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00900
Terpenoid backbone biosynthesis
tdc01100
Metabolic pathways
tdc01110
Biosynthesis of secondary metabolites
Module
tdc_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
119363209
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tdc01006
]
119363209
Enzymes [BR:
tdc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
119363209
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
119363209
2.5.1.29 geranylgeranyl diphosphate synthase
119363209
Prenyltransferases [BR:
tdc01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
119363209
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Prolactin_RP
DUF3853
Terpene_synth_C
Motif
Other DBs
NCBI-GeneID:
119363209
NCBI-ProteinID:
XP_037484420
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All DBs
Position
2B:225140919..225142415
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AA seq
356 aa
AA seq
DB search
MAAFHPLVASRVRLTTPLLPVAAPAAAAAAGVSFHRRRFSAIVAAATAPAATGFDFNSYM
GERAVAVNSALDAAVPAGEPPAALHEAMRYALLAGGKRVRPALCLAACVVSGGREAWAMA
PAAAVEMVHTMSLVHDDLPCMDDDNLRRGKPTCHVMYGEPIAVLAGDALLALAFQHMASV
DSYPPDVDPAKHTARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTETVPLDRLEYIHLH
KTAALLEASVVIGAIIGGGSEEQIERLRKYARSIGLLFQVVDDILDVTKSSEELGKTAGK
DLASDKTTYPKLLGLEKSREFAEKLLSDAKEQLADFDKEKAAPLLYLANYIAYRQN
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgttccaccccctggtcgcctcgcgcgtccgcctcaccaccccgctcctcccc
gtcgccgcgcccgccgccgccgccgcagccggggtctccttccaccggcgccgcttctcc
gccatcgtcgccgcggcgaccgcgcccgcggccaccgggttcgacttcaactcctacatg
ggggagcgggcggtggccgtgaacagcgccctggacgcggccgtcccggccggcgagccc
cccgcggcgctccacgaagcgatgcgctacgcgctgctggccgggggcaagcgcgtgcgc
ccggccctctgcctggccgcctgcgtcgtgtccggcggccgcgaggcctgggcgatggcc
cccgccgccgcggtcgagatggtgcacaccatgtcgctcgtgcacgacgacctcccctgc
atggacgacgacaacctccgccgcggcaagcccacctgccacgtcatgtacggcgagccc
atcgccgtgctcgccggcgacgccctgctcgcgctcgccttccagcacatggccagcgtc
gactcctaccctccggatgtcgaccccgccaagcacaccgcccgcgtcgtccgggccatt
ggtgagctcgcgcgctgcatcggatcagagggcctcgtcgccggccaggttgttgatctg
gagatgactggctcaactgagactgtaccacttgaccgccttgagtacatccatctgcac
aagactgctgccttgcttgaggcctcagtggttattggagcaatcatcgggggtggctca
gaagagcagattgagcggttgcgcaagtacgcgagatcaattgggttgctgttccaggtg
gttgatgacattcttgatgtgaccaagtcatcagaggagctagggaagacagctgggaag
gacttggcgagtgacaaaacgacataccccaagttactagggttggagaagtcacgggaa
tttgcggagaagttgctttctgatgcaaaggagcaacttgctgattttgataaagagaag
gcagcaccgctattgtacttggccaattatattgcctatcggcagaactaa
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