Triticum dicoccoides (wild emmer wheat): 119363609
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Entry
119363609 CDS
T07278
Name
(RefSeq) E3 ubiquitin protein ligase RIN2-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119363609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119363609
Enzymes [BR:
tdc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
119363609
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119363609
Multi subunit type E3
ERAD complex
119363609
LMBR1L-GP78-UBAC2 complex
119363609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUE
zf-RING_2
zf-C3HC4
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
E3_UbLigase_EDD
zf-RING_16
zf-RING_5
DUF6069
Motif
Other DBs
NCBI-GeneID:
119363609
NCBI-ProteinID:
XP_037484884
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All DBs
Position
2B:complement(320107780..320143369)
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AA seq
558 aa
AA seq
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MAVNCLYVAAASTAASAAALQWWAASFLDAPLNRDVGGGDWLETSLRSHVTVALLANLVA
HVLLVLLLALKTLFFVRLTSTETRKVLEHIINYVIYKGTFLPLVVPPNSQQIILWSTWLV
LLCSLKMFQSLARERLECLNASPSATPLKYLRVYSALLLVLSTDLLWMKLCVGFCSSCNS
KLFWLMLFEPLSIAFESLQSIMVHGFQLFDIWQRHLMDSGVDYLDFQKTYKQAAGSFSEW
RGQLIRNFGFVIDLISLLMSLGHYSMIFWLRGMAFHLVDAVLLFNLRALVVSFLKRIRTY
IKLRKALRSLDGALPDAKYDEICTYDDECAICRGPMARAKKLPCNHLFHLPCLRSWLDQG
LMEGYSCPTCRRPLFLSAQGHSRSTTAEVANVQLISEQLNMGLNQQRVPEQQDPSDGVWR
GAGLDSRWAPPWSSPGVDDPSSSSAVRSVGLSGVQMMMRQFASVTDNYGHADATWNLWPE
SMAGPSIVPSSSSRPDVSSASLRFRGTAGTINGSMSRVNTMVDRVREVLPHMPDELIIED
LMRTNNVNATVNNLLLMQ
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgaactgcctatacgtcgccgccgcatccacggcggccagcgccgccgcgctg
cagtggtgggcggcgtccttcctcgacgccccgctgaaccgggatgtcggcggcggggac
tggctcgagacctcgctgcggtcgcacgtgaccgtcgccctcttagcgaatctggtggcg
cacgtgctcctcgtcctcctcctagctctcaagacattattttttgttcggttaacttct
acagagactagaaaagtgttggaacacatcattaactatgtaatctacaagggaactttt
ctcccattggttgtgcctcctaattctcaacaaataatcctttggtcaacttggctagtc
ctcctttgttcactgaagatgtttcaatcattggccagagaacgtcttgagtgcctcaat
gcgtcaccctcagcaactccattgaaatatctccgtgtatattctgcactgttgctggtt
ctttcgactgatctactatggatgaagctttgtgtagggttctgcagttcatgcaattct
aagttattttggcttatgttatttgagccacttagtattgcctttgagtcactgcagtct
atcatggtgcatggatttcagttgtttgacatttggcagcgacatctgatggacagtggt
gtggactatcttgatttccaaaaaacttataaacaagcagcaggttcattttctgaatgg
agaggccaacttataaggaattttggttttgtcattgacctgataagcttgttgatgtca
cttggtcattattcgatgatcttttggctccgtggtatggcgtttcacctggtcgacgca
gtcctcctgtttaacttgcgtgctcttgtagtttcatttttgaagaggattaggacctac
attaagttaagaaaggcactccgttcgctcgacggagcacttccagatgctaaatacgat
gagatctgcacatatgatgatgagtgtgccatctgccggggaccaatggctcgagctaaa
aagttgccttgcaaccatctatttcatctaccttgcttgcgatcttggttggatcaagga
ttaatggagggttactcttgtccaacttgtcgaaggccactctttctttcagctcaagga
cattctaggtcaacaacagcagaggtagcaaatgttcagctaatttcggaacagctaaat
atgggattaaatcagcaaagggttcctgaacagcaggatccttcagatggtgtttggaga
ggtgcgggtcttgattctcgctgggcaccaccgtggtcgagccctggggtcgatgacccc
agttcctctagtgcagtgagatccgtggggcttagcggagttcagatgatgatgaggcag
ttcgcttctgtgactgataattatgggcatgcagatgccacctggaatctgtggcctgag
tcaatggcaggcccttcaattgttccatcatcttcctcgaggcctgatgtgtcttctgct
agcttgcggttccgaggcacggcaggaacaattaacggaagcatgtcgcgggttaatacc
atggtagatagagtacgagaagttttaccccatatgcctgacgagctaattattgaagac
ctgatgagaacgaataacgtgaatgccactgtgaataatcttctgctgatgcaatga
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