Triticum dicoccoides (wild emmer wheat): 119363623
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Entry
119363623 CDS
T07278
Name
(RefSeq) DNA damage-binding protein 1-like isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119363623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdc03021
]
119363623
03041 Spliceosome [BR:
tdc03041
]
119363623
03036 Chromosome and associated proteins [BR:
tdc03036
]
119363623
Transcription machinery [BR:
tdc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
119363623
Spliceosome [BR:
tdc03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
119363623
Complex B
119363623
Complex C
U2 SnRNP specific factors
119363623
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
119363623
TFTC complex
119363623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
119363623
NCBI-ProteinID:
XP_037484896
LinkDB
All DBs
Position
2B:complement(327047404..327067544)
Genome browser
AA seq
1127 aa
AA seq
DB search
MCFMRTRCSMDEYYPVVAMIINRKGSDANDLSMYALAANDGGIQYLSGYSEPGPLALEIA
EIPQLDGFGLLFRAGDILIVDLRDPKDICCTIRISMTGSLVGEQISVEDSCRGLDVDDDV
AACALLELRDSGNNIMMDDSYMAIDGADNPGSMKSRVICSWSWEPDAMRGQPRLIFCLDD
GEFHILEFNWDTEGLKVLPERVHRGLPCKPLLWMDRGMIAGFVEMGDGMILHLEHGRLVH
KSTVQNVGPILDLAIADYHGEKQDQLFSCCGMCPEGSLRVIRNGVNVEKLLRTEPIYQGV
TGLWTLRMKRTDTYHSFLVLAFVEETRILSVGLSFNDISDAVGFQPEVCTLACGLIADGL
LVQIHSKGVKLCLPTSYAHPEGATLTSPVCVDWYPDVTISVGAVGHDVVAVATSNPCCLY
ILRVRPLSSLQYELYETQHVQLQYEVSCISIPEEDSRLRTSSSAFGGDFRKRKGNNSAAE
VDVRMFAVIGTHKPSVEVISLEPDEAFRLLSIGSISVNNALGAPVSGCIPENVRFVASER
FYILAGLRNGMLLRFESGTSKDQYLPVSFYKESFAPSLNTLLQLVAIRHIGITPVGLVPL
RDSANSDIIVLSDRSWLLYASRHSLAYSSISFLPASHVTPVSSVDCPSGLLFVAENCLHL
VEMVHGKRLNAQKFSVGGTPRKVLYHSDSRTLLVMRTGLTGASCSSDIVQIDPNNGILLS
RFKCELGETAKCIQIVKIGSEQVLIVGTSKSTDRPMMPNGEAESSIKGRLIVLSLDTLGS
PHECSSFIPTSNLSSSSHTGSFPEIVGYANEEFSSNSMCSSPDDICYNQIQFEQIAGHLR
SLTHVTFTGAVLAVYPYLDRYVLAAAGNTLSVFGFVNENPHRMKKYAVSRTRFTITCLKT
YASQIAAGDCRDGVLFYSYHENLRKLELVYADPAQRLVGDVVLLDCETAVVSDRRGSISV
LSCPGLEVSESPEKNLAVQCSFFMGEIAMSIQKAAFKYRLPIGDEADPVLESAYNCVVAS
TLLGSVFVMIPLTSEEHQLLQDVQERLSLHPLTAPIMGNDHAEFRRRGIPSGVPSILDGD
MLVQFLELTSEQQQTVLDDGSSVKAPRRSISVFQVMRMLERVHYALN
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcatgaggactcgctgctcgatggatgaatattacccagttgtagcaatgata
attaacaggaagggctctgatgcgaatgacttgtcaatgtatgcactagctgccaatgat
ggtggcatccagtacctatctggttactcagaacctggacctttggcgcttgagatcgca
gaaattcctcagctggatggctttggacttctatttcgtgctggtgatattctaattgtg
gatcttagggacccaaaggacatctgttgtaccattagaataagcatgacaggaagtctg
gttggagaacaaatcagtgttgaagattcatgtcgaggattagatgttgatgacgatgtt
gctgcttgtgctttgctagaactgagagattctggaaataacataatgatggatgacagt
tacatggctattgacggtgctgataacccaggaagcatgaaatcaagggttatttgctca
tggagctgggagccggatgccatgcgaggacaaccgaggctgatcttttgcttggatgat
ggagaatttcatattctggaatttaattgggatacggaaggattgaaggtattgcctgag
cgtgtccataggggtttgccttgtaaacctcttttatggatggacagaggaatgatagca
gggtttgtagagatgggagatggaatgatccttcatcttgaacatggtagactggtgcat
aaaagtacagttcagaatgtaggaccaatattagatttagcaattgctgactaccatggt
gagaagcaggatcagttgttttcatgttgtggaatgtgcccggagggatcattgcgtgtt
ataaggaatggtgttaatgtggagaaacttctgaggactgaacctatttatcagggtgtt
actggtttgtggacgttgagaatgaagagaactgatacatatcactcttttcttgtattg
gcatttgttgaggaaacaagaatactatcagtaggactgagttttaatgacatcagtgat
gctgtgggatttcagcctgaggtttgcactttggcatgtggtttaatagctgatggttta
cttgtgcaaattcacagcaaaggcgtaaagctttgtttgcctacatcatatgctcaccct
gagggcgccaccttaacttctccagtttgtgttgactggtatcctgatgtcactatcagt
gttggtgctgttggacatgatgttgttgctgtcgctacatcaaatccttgttgcctatat
attctcagggtcagaccattatcttcactccagtacgagttgtatgagacacagcatgtc
caattgcaatatgaagtatcttgcatatccattccggaggaggactcgagacttagaacg
tcatcttctgcttttggtggtgattttaggaagagaaaagggaataattctgctgctgaa
gttgatgttcgcatgtttgctgtcattggaactcataaaccttctgtggaagtcatctca
ttggaacctgatgaagcatttaggctgctctctattgggtctatatcagtgaacaatgcg
ctcggtgctccagttagtggctgtatacctgaaaatgttcggtttgtagcatctgagagg
ttctacattctcgcaggtctaagaaatggcatgctactcaggtttgagtcaggaacaagc
aaagaccagtatctccctgtttccttttacaaggagtcttttgcaccttctcttaatact
ctccttcagttggttgctataaggcatattggaattacccctgtaggcttggtaccattg
cgtgattcagctaattctgatattattgttctcagtgataggtcttggctattatatgct
agtagacacagcttggcatattcatccatctcatttctgcctgcgtcccatgtgactcca
gtatcttctgtggattgccccagcggtctgctatttgttgcagagaactgtttacatttg
gttgaaatggttcatggcaaaagattaaatgcacaaaagttttcagttggagggactcca
aggaaagtgctataccacagcgatagtagaacactgttggttatgagaactggtttaact
ggtgcatcatgttcttcagatattgtccaaatagatcctaataatgggatcttgctttcc
cgattcaagtgtgaacttggtgaaactgcaaaatgcatccagattgtgaaaataggaagt
gagcaagtgttaattgttgggacaagtaaatctactgaccggccgatgatgccaaatggc
gaagcagaaagcagtatcaaaggacgcctaattgttctaagcttggatactcttggaagt
cctcatgagtgcagttcatttattccgacttctaatttgagttcctcttctcatacgggc
tcattccctgaaattgttggatatgcaaatgaagaattctctagcaacagcatgtgcagc
agtcctgatgatatttgctacaatcagattcaatttgaacaaatagcaggacacctgaga
tcactgactcatgttaccttcactggtgcagttcttgctgtatatccatatctagaccga
tatgtgttggcagcagctggtaatacgctttctgtatttggttttgtgaatgaaaatcct
catcgtatgaagaagtatgccgtgagcagaacacgatttactattacttgtttgaagaca
tatgcatcacagattgcagcgggtgattgtcgtgatggtgttctcttctattcttatcac
gagaatcttaggaagttggaacttgtttatgctgatcctgctcaacgattggtgggtgat
gttgtcctcttagactgtgaaactgctgttgtgtcagatcgtcgtggtagcatatctgta
ttatcctgccctggactggaagtttctgaaagtccagaaaagaacttagctgtacaatgt
tcattttttatgggcgaaatagctatgagcatccagaaggctgcatttaagtatcggctc
cctattggtgatgaggcagacccagtgttggaatcagcttataactgcgttgtggcgagt
actttgctggggagtgtttttgttatgattccgctcaccagtgaggagcatcaactgttg
caagatgtccaagaaagactttcacttcacccgttgactgctccaatcatgggaaatgac
catgcagagtttcgtcgacgtggtatcccgtcgggagtgccttcaattctggatggtgac
atgctggtgcaattcttagagctcaccagtgagcaacagcaaactgtacttgacgatggg
tcttcagtaaaggcaccacgcaggtctatctcagttttccaggtcatgcgaatgttggag
cgggtccactatgcgctgaactga
DBGET
integrated database retrieval system
