Triticum dicoccoides (wild emmer wheat): 119364088
Help
Entry
119364088 CDS
T07278
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119364088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdc04131
]
119364088
Membrane trafficking [BR:
tdc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
119364088
Hops complex
119364088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
Clathrin
VPS11_C
zf-C3H2C3
TPR_Vps41
zf_RING_Vps8_fungal
zf-C3HC4_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
119364088
NCBI-ProteinID:
XP_037485391
LinkDB
All DBs
Position
2B:435471998..435477541
Genome browser
AA seq
957 aa
AA seq
DB search
MYQWRKFEFFEEKGAGRGGGGGAPAVPAEIAGRVTCSSGGRGRVAIGCDDGTVGLLDRGF
RLSYGFQAYASSVLFLQQLKQRNVLVTVGDDDQASSQSSAVCLKVFDLDKVQEEGSSTTT
PFCVQILRVFTNQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFTL
QVEPVSDGTSSPITGLGFRVEGQAHQLFAITPSSITLFSLHHQPPRRQTLDQIGCETNAV
AMSDRMDLIVGRPEAVYFYEVDGRGPCWAFDGEKKFVGWFRGYLLCIIEDQRSRKNTLNV
YDLKNRLIAHSMPVGDVSHLVTEWGYIILIMSDKRILCIGEKDMESKLDMLFKKNLYTVA
INLVQSQQADPASTAEVLRKYGDHLYGKQEYDEAMSQYIHTIGHLEPSYVIQKFLDAKRI
HNLTNYLEKLHDRGLASKDHTTLLLNCYTKLKDVEKLNHFIKDEDGVGEIKFDVETAIRV
CRAAGYHEHAMFVAKKAGRHELYLKILLEDLARYDEALQYISGLEANQAGLTVKEYGKIL
VDHRPAETVKILLRLCTDGGDPTTRRGSNSMRLLMIPSPMDFVNIFVHSPQYLMEFLENY
IKAVKDSPAQTEIHNTLLELYISKDLSFPSMSQENGFDHHNSKERKGKEITNGYKSGTRE
KAKLGKEENKTAKDIVDRQRKGLALLKSAWTPEMEEPLYSVDLALIICNANAFKDGLLFL
YEKLKLYKEVISCYKQAHDHEGLIACCKKLGDSTQGGDPSLWGDLLNYFGELGEDCSKEV
KEVLTYVEKADVLPPIVVLQTLSKNPCLTLSVVKDYIARKLEQESKLIEDDRKSVDKYQE
ETELMKREIEDLKTNAKVFQLSKCTACTFTLDLPAVHFMCMHSFHLRCLGDNEKECPECA
PEYRSVMEAKQKLELNARDHDLFFRQLRGSKDGFSVVADYFSKGVVSKTTIPPENAP
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagtggcgcaagttcgagttcttcgaggagaagggggcagggcgcggtggggga
ggcggcgccccggccgtgccagccgagatcgcgggccgagtgacctgctcctcgggcggc
cgtggccgcgtcgcgatcggctgcgacgacggcaccgtggggctcctcgaccgcgggttc
cgcctctcctacgggttccaggcctacgcctcatccgtcctcttcctccagcagctcaag
caaagaaatgttcttgtcacggttggagatgatgatcaagcatcttcacagtcatcggca
gtctgtctaaaagttttcgaccttgataaagtacaagaagagggttcaagtacgacaacc
cctttctgtgttcaaattttgcgggtcttcacgaatcaatttcctgaggccaagattaca
tcatttttggttttagaagaagctcctcccatcctgttgattgctatcggattggataat
ggttgcatttattgcatcaaaggtgatattgcacgtgagcgtatcacacgcttcacattg
caagttgaacctgtttcagacggcacaagttcacctattactggtcttgggttccgagtt
gaagggcaggcacatcagctctttgccattactcctagttccataaccttgttcagcttg
catcatcaaccaccaaggaggcaaacacttgaccaaattggttgtgagaccaatgccgta
gcaatgagtgaccgcatggatctgattgttggtagaccagaagctgtgtatttctacgaa
gttgatggtagaggcccttgttgggctttcgatggtgagaagaagtttgtgggttggttt
cggggttatttactttgcataattgaagatcagagaagccgaaagaatactcttaatgtt
tacgatcttaagaatcggttaattgcgcatagcatgcctgtgggggatgtttcacatttg
gtcactgagtggggctatattattctcataatgagtgataaaaggatactctgcattggg
gagaaagacatggaaagtaagctcgacatgttatttaagaaaaatctttatacagtcgca
atcaatcttgtacaaagtcagcaggctgatcctgcttcaactgccgaggttctacgtaag
tatggtgaccatctgtatggaaaacaagaatatgatgaggccatgtctcaatatatccac
acgattggtcatcttgaaccatcatatgttatacagaagtttctcgatgcaaagcgcatc
cacaacctgacaaattatctagaaaagttacatgatagaggattagcatccaaagaccac
acaacccttctgttgaactgctataccaaattgaaagatgttgagaagctgaaccatttc
atcaaagatgaagatggggtaggtgaaattaagtttgatgtggaaactgccataagagta
tgtcgtgcagctggatatcatgaacatgctatgtttgtagccaaaaaggctgggagacat
gagctgtatttgaagattttacttgaggatcttgctagatatgatgaggcgctgcagtat
atatctggccttgaggcaaatcaagctggtcttactgtaaaagaatatggaaaaattctt
gtggaccatagacctgctgaaactgttaaaatactgttgaggctttgtactgatggggga
gatcctacgacaaggagaggttcaaatagcatgcgcttgcttatgataccttcaccaatg
gactttgtaaatatatttgtgcacagcccacaatatctcatggaatttctagaaaactat
atcaaagcagtcaaggactcacctgctcagacagaaatccataacacccttctggagctg
tatatatcaaaagatttaagcttcccatctatgtcacaagaaaatggctttgatcatcac
aatagtaaagaaagaaaagggaaggaaattacaaacggctataaatcaggcacaagggag
aaagcgaaacttggaaaagaagaaaataaaacagcaaaggatattgttgacagacaaagg
aaaggacttgctttgctgaagtctgcctggacacctgagatggaagaacctttgtattct
gttgatcttgctcttatcatttgtaatgcaaatgcatttaaagatggcttgttatttctg
tatgagaaattaaaactctacaaagaggttatcagttgctacaagcaagctcatgaccat
gaaggtttaattgcatgctgtaagaagctaggggactcaactcaaggaggggatccatct
ctctggggtgacctgttgaattattttggtgagcttggggaagattgctctaaggaagtt
aaagaggtcttgacctacgttgagaaggcggatgttttgcctccaattgttgtcctacag
acactatcaaaaaacccatgcttgactctgtcagttgttaaggattacattgctcgcaaa
cttgagcaagaatcaaagctaatcgaagatgacagaaaatctgttgacaagtaccaggaa
gagacagaattgatgaaaagggagatagaagacctcaagacaaacgcaaaggtttttcaa
ctaagcaagtgcacagcatgcaccttcaccctagatcttcctgctgtccatttcatgtgc
atgcactcgttccatcttcgctgccttggggacaatgagaaggagtgcccggaatgtgca
cctgaatacagatctgttatggaggcaaagcagaagctagaactaaatgccagggatcat
gatctcttcttcaggcagttaaggggttcgaaggatggcttttctgtggtagcagactac
ttcagcaagggcgtagtgagcaaaactacgattccacctgaaaatgccccatag
DBGET
integrated database retrieval system
