KEGG   Triticum dicoccoides (wild emmer wheat): 119364448
Entry
119364448         CDS       T07278                                 
Name
(RefSeq) DNA repair protein RAD50-like
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03440  Homologous recombination
tdc03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    119364448
   03450 Non-homologous end-joining
    119364448
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tdc03032]
    119364448
   03400 DNA repair and recombination proteins [BR:tdc03400]
    119364448
DNA replication proteins [BR:tdc03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    119364448
DNA repair and recombination proteins [BR:tdc03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     119364448
    BRCA1-C complex
     119364448
   NHEJ (non-homologous end-joining)
    MRX complex
     119364448
SSDB
Motif
Pfam: AAA_23 SMC_N AAA_15 AAA_21 SbcC_Walker_B Rad50_zn_hook AAA_29 ABC_tran AAA_13
Other DBs
NCBI-GeneID: 119364448
NCBI-ProteinID: XP_037485820
LinkDB
Position
2B:complement(496489491..496517787)
AA seq 1316 aa
MSTVDKMLIKGIRSFGPESKNVITFFRPLTLIVGSNGAGKTTIIECLKLSCTGELPPNSR
SGHTFVHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEFKAIESVLQTI
NPHTGEKVCLSYKCADMDREIPALMGISKAILDNVIFVHQDESNWPLQDPSTLKKKFDDI
FSATRYTKALEVIKKLQKDQAQEIKTFRLKLENLQTLKDQVYRLRDSIAQDQEKSDALKA
QMEDLKTNIQAVENKIRRTETSIMDLRRLQEQISTKATARSTYLTLQQQQHAALSEENED
TDEELREWQTTFEEKIALLDTKIGKLEREMNDEYTKISLLSETINDSTRQIGKLQAEADA
HVSVKHERDSAIRKIFNKHNLGPIPDAPFTNAIATNLTYRTKARLSSLEDDLQEKKKSSE
TQLEFLWGRYLKVNVRYSEVDGQIQSKKESKIGVLRRMKDKENERDAAEMELSKHNLARI
DERDRHLQIEVEKKTNALGERDYDLIISQKRPEIYALDHKIKTLHREKDNITTDADDRVK
LELKKDELEKCKKKLKKIYDEHKDKFRSVLKGRLPYEKDVKKEITRAFGFVDAEYNDLSS
KSLEAEQQSKLAQMKISAARSHLSKLQKDLDAKRNHLNSKLQPITKVSVDINTYPKILKD
AMDDRDKQTNTYNYAKGMRQMYEPFEKVARQQHKCPCCDRVFTPDEEDIFVKKQRTTSTS
TAERLNVLAIELSNAEDFFNRLDNFRVVYDEYVKLGKENIPLAEKDLEQLLADESEKAQI
FKDLVSALAQVKTDRDGVEVLLHPVDTINRHVQEIQELEPQVKDLEYKLDSRGQGVKSVE
EIQLELNSVQRARDTLISEVDDLRDQQKILSEDLSNAQMRWHALREEKLRASSVLLKFKK
AEEDLVLFAEEKEQLIIDQKHLEEALVPLSKERESLLQEHKALKERLDQEYDQLAERKRG
FQQEIDALGTLNTRIKGYLDAKKVEKLNELQERHTLSLSQLQKCEARKQDISVELDKSKQ
LLRSQDQLKRNIDDNLNYRKTKAEVDRLAHDIELLEENVLSIGSKSTIRADHKRHAQEKE
KLLSEYNRCEGTISVYQSNISKHKLELKQTQYKDIEKRYFNQLLQLKTTEMANKDLERYY
AALDKALMRFHTMKMEEINKIIKELWQQTYRGQDIDCISISSDSEGAGTRSYSYRVVMQN
GGAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL
RIMESRKGQENFQLIVITHDERFAQLIGQRQLAEKYYRVSKDEQQHSKIESQEIFD
NT seq 3951 nt   +upstreamnt  +downstreamnt
atgagcacggtggacaagatgctgatcaagggaatccggagcttcggcccggagagcaag
aacgtcatcaccttcttcaggccgctcaccctcatcgtcggctccaacggagccggcaaa
accacgatcatcgagtgcctgaagctgtcctgcaccggcgagttgccccccaactcccgc
tccggccacaccttcgtccatgaccccaaggtggcaggtgaaaccgaaacgaaagggcag
attaagctgcggtttaagacggcagcaggaaaggatgtggtgtgcatccgatctttccag
cttacccagaaggcatcaaagatggagtttaaggcaatcgagagcgtcctccagaccata
aatccacacacgggcgagaaggtttgtctcagctacaaatgtgctgatatggatagggag
attccagccttaatgggtatttcgaaggctatattggataatgttatatttgtgcaccaa
gacgaatccaattggccgttacaggacccgtcaacacttaagaaaaagtttgacgacatc
ttttctgctacccgctataccaaagctctcgaagtcataaagaaacttcaaaaggaccaa
gcacaggaaatcaagacttttaggttaaagctggagaaccttcaaactcttaaagatcaa
gtatacaggcttcgggacagtattgcgcaagatcaagagaagtcagatgccttaaaagct
caaatggaggacctgaaaacaaacatccaggctgtcgaaaacaaaatccgtcgtaccgaa
acaagtatcatggacttgaggagacttcaggagcaaattagcaccaaggcaacagctaga
agtacatatttaacacttcagcagcaacagcatgctgccctttctgaggaaaatgaagat
accgatgaggaactgagggagtggcagacaacatttgaagaaaaaattgcgctactggat
acaaaaatcggtaaacttgaacgagagatgaatgatgaatatacaaaaatctctctgcta
tctgagaccatcaatgattcaacacgtcaaatagggaagctccaggcagaagctgatgct
cacgtgtcggtgaagcacgaacgagactcagccatcagaaagatattcaataaacataat
ctcgggccaattcctgatgctccttttactaatgctattgccacgaaccttacatacagg
actaaagcaagactatcgagtctcgaggacgatttgcaggaaaagaagaaatctagtgag
acacagttagagtttctttggggacgttatctcaaagtaaatgtccgctactctgaagtt
gatggccagatacaatctaagaaagaatctaagataggtgttttaaggcgcatgaaagat
aaagagaatgaacgagatgctgcagagatggagctttcaaagcataatctggcccgtatt
gatgaaagagatcggcatttgcaaattgaggttgagaagaagacaaatgccttgggagaa
agagactatgatttgattataagtcagaagcgcccagagatatatgcattggatcacaag
ataaaaacacttcaccgggagaaagataacataactactgatgctgatgacagagtaaaa
ttagaactgaagaaggatgaattggaaaagtgcaagaagaaacttaaaaagatatatgat
gaacataaggacaaatttagaagtgttcttaaggggaggcttccttatgagaaggatgtc
aagaaggagattactcgagcttttgggtttgtagacgcagaatacaatgatttgagctca
aaatctctggaagcagaacagcagtcgaaattggcacaaatgaaaatttctgctgctaga
agccacttgtcaaagctccaaaaagatttggacgcaaaaagaaaccatctgaactcgaaa
cttcaacccattactaaggtatctgttgacatcaacacttaccccaagattctgaaagat
gccatggacgacagagataaacaaacaaatacgtacaattatgcaaagggaatgcggcaa
atgtatgaaccttttgaaaaagtggcccgccagcagcacaagtgtccttgctgtgatcgt
gttttcacacctgatgaagaggacatctttgtgaagaagcaaaggactacaagcacaagt
accgcagagcgcctgaatgtactggcaatcgaattatcaaatgctgaagactttttcaat
cgattggataatttccgtgtggtttatgatgaatatgtgaaactggggaaagagaacata
cctttagcagagaaggatttggaacaacttttggcagatgaaagtgagaaggcgcagata
ttcaaagaccttgtgagtgctcttgctcaagttaaaacggacagggatggagtcgaagtc
ttgttacatccagttgatactatcaacaggcatgtgcaagaaatacaggagttagaacca
caagtcaaagatcttgaatataagcttgattctcgtggccaaggtgttaaatctgtcgag
gaaatccagttggagctgaactctgtgcagagggcaagggacacattgatcagtgaagta
gacgatctcagggatcagcaaaaaatacttagcgaggatctgtcaaatgctcagatgcgg
tggcatgctcttagggaagaaaaactaagagcctcaagtgtattgctgaagttcaaaaag
gctgaagaagatttggtactttttgctgaggaaaaagagcaactgatcatagatcagaag
catttagaagaggctcttgttccattgtcaaaagagagagaaagcttgttgcaagagcat
aaagctttgaaggaaaggcttgaccaggagtatgatcagctagctgaaagaaaaagggga
ttccagcaagaaatcgacgcacttggaacccttaacacacgcatcaaagggtacctggat
gcaaagaaagtagagaagcttaatgaactgcaggaaaggcataccctatccctgtctcag
ttacagaaatgtgaggcaagaaagcaagacatctcggttgagcttgacaagagtaaacag
ctattgcgcagccaagatcaattgaaaagaaacattgatgacaatctgaactacaggaaa
acaaaggctgaagtggatcgacttgctcatgatatcgagttacttgaagaaaatgtgctt
tccatcggcagcaagtccacaataagagctgatcataagcggcatgctcaagaaaaggag
aagcttctttcagagtataataggtgtgaaggaacaatttctgtttaccaaagtaatatt
tcaaagcacaaacttgagcttaaacagacacaatacaaggatattgagaaaagatatttt
aaccaacttctccaacttaagacaactgagatggcaaataaggacttggagcgatactat
gctgctttggataaggctcttatgcggttccataccatgaaaatggaagagataaataaa
ataataaaggaattgtggcagcagacatacagaggccaagatattgattgcataagcatc
agttctgactccgagggtgcaggcactcgatcatatagctatcgtgttgtcatgcaaaat
ggtggtgctgagctggaaatgcgagggcgatgcagtgctggccagaaggttcttgcttct
cttataatcagactggcactggcagagacattctgtctgaattgcggcatattagctctg
gatgagccaaccaccaatcttgacgggccgaatgcggagagcctagctgctgccctattg
agaataatggaaagcagaaaaggccaggagaacttccagctgattgtaatcacccatgat
gagcggtttgctcagcttattggtcagaggcagcttgccgagaagtactaccgagtttcc
aaggatgagcaacaacacagcaaaattgaatcccaggagatatttgactga

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