Triticum dicoccoides (wild emmer wheat): 119364965
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Entry
119364965 CDS
T07278
Name
(RefSeq) regulator of nonsense transcripts UPF2-like isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03013
Nucleocytoplasmic transport
tdc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119364965
03015 mRNA surveillance pathway
119364965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119364965
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
119364965
mRNA cycle factors
P-body specific factors
119364965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Glycos_transf_N
Motif
Other DBs
NCBI-GeneID:
119364965
NCBI-ProteinID:
XP_037486436
LinkDB
All DBs
Position
2B:576337966..576350155
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AA seq
1197 aa
AA seq
DB search
MEHMENESHEGKKQDEEGHHNNEVVRLEEYKKLIDVKTALRHSNLNPERPDASHLRTLDS
SIKRNTAVIKKLKVINDEQKDGLMEELKSVNLSKFVSEAVSYICEAKLRSADIQAAVQIC
SLLHQRYKDFSPCLIQGLLKAFFPGKAGDDIDPDKNSRAMKKRSTLKLLMELYFVGIVED
ASTFINIIKDLTLVEHLKDRETTQTNLTLLASFARQGKHFLGLQKHGQEAYDEFFMGLNI
SDDLKTFFKKSLSSYYDAAVAILQSEHASLRAMESENAKILNVKGELSDENTALYEKLRK
SFDQLLRCISSLAEALDMQPPVMPDDGHTTRVTTASELSPSGKHFSAVEPIWDDEDTKAF
YESLPDLRVFVPGVLLGEAEPKLVDQHGKVHEQTGEQKLEQGTEVQNNAEAPVPEHQLEG
KTNVGSKNSGKKDKTGKEISKEKEADQKGDIEREKVRVTDGASLDNLLQRLPRCVSRDLI
DQLTVEFCYLNSKANRKKLARALFNVPRTSLELLPFYSRLVATLSTCMKDLPSMLLSMLE
EEFNFLMNKKDQIKIETKIRNIRFIGELCKFNIAPSGLVFSCLKACLDDFSHHNIDVACN
LLETCGRFLYLSQGTTVRMSNMLEILRRLKNVKNLDPHHSTLVENAYYLCKPPERSARVS
KVRPPLHQYIRKLLFSDLDKTSVQHVLRQLRKLPWAECEEYLVKCFLKVHKGKYSQVHLI
ALLTAGLSHYHDDFHVAVVDEVLEEIRVGLELNDYAMQQRQLAHMRFLGELYNYEHIDSS
VIFDTLYLITVFGHGTLEQDLLDPPEDFFRIRMIVTLLQTCGHYFDRGSSKRKLDRFLLH
FQRYILNKGPLPLDVEFDVQDMFAELRPNMTRYSSPELLASALAELEENEKTKQSESAAS
DASCKSSANRPDKNGTGHEEVADSESYSGSRSIYRDGSEDGDSLYEENSDDRSGNGVVDD
DDAMPSGSDEEERVQVRHKVVQVDPKEQEDFDRELRALLQVRHKVVQVDPKEQEDFDREL
RALLQESLESRKLEPRVKSTLNMTVPMKIVEGSKDSRATERESGEELAAEENGNAGGGSE
VKVCVRVLVKKGHKQQTRQMLIPGDCSLVQSTKQQEAALLEEKQNIKQKILEYNEREEEE
FNASSFQTGFWGQGGSSAGGSIGSAGRGSWDGSNRGGRGRQRYYIAGGIYHGYGRGR
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggagcacatggaaaatgagagccacgaggggaaaaagcaagatgaagaggggcatcat
aacaatgaggtggtccgtcttgaagaatacaagaagcttattgacgtaaagacggctctc
cgccacagtaacctaaaccctgagaggcctgatgcaagtcacctgagaactcttgattcc
agtattaagcgcaacacagcagttatcaagaagctcaaagtgataaacgatgaacaaaag
gatggcttaatggaagaattgaaaagtgtgaatctaagcaaatttgtcagtgaggcagtt
tcttacatttgtgaggccaaacttcgttctgctgatatacaagctgctgttcagatttgt
tcgctgcttcatcaaaggtacaaggacttctctccttgccttattcaaggactgctgaaa
gccttctttccagggaaagctggagatgatatagatccagataagaactcaagggccatg
aagaaaagaagcacactgaagcttcttatggaattgtattttgttggaattgttgaagat
gctagtactttcataaacattataaaggatctgacgttggtggagcatttgaaggaccgt
gaaacaactcagacaaatttgactctccttgctagttttgctcgccaaggaaagcatttt
cttggattacaaaaacatgggcaagaagcttatgatgagttttttatgggcctcaatatt
tccgatgatctgaagacgttctttaagaaatccttgagctcttactatgatgccgcagtt
gcaattctccagtcagaacatgcgtctcttcgtgcaatggagtctgaaaatgcaaagatt
ttaaatgtgaaaggggaactaagtgatgagaatactgccttgtatgagaagcttcggaaa
tctttcgatcagttattgcgctgcatttcatccttagctgaagctcttgatatgcagcct
cctgttatgccagatgatggacatacaacaagggtaactacggcgtcagagttatcccct
tctgggaagcatttttctgcagtagaacctatctgggatgatgaagacacaaaggcattt
tatgagtctttgcctgatctcagagtattcgtgcctggtgtactattgggagaagctgaa
ccaaagttggtagatcaacatggaaaggttcacgaacaaactggtgagcaaaaattggaa
caaggaactgaagttcaaaacaatgctgaagctcctgtccctgagcaccagttggaagga
aaaacaaatgttggatccaagaatagcggaaaaaaagataaaacaggcaaagaaatttct
aaagaaaaagaggctgatcaaaaaggagatattgaaagagaaaaagtaagagtcacagat
ggtgcaagtttggacaacctgcttcagaggctgccaagatgtgtgagccgagatctaatt
gaccaattgacggtagagttttgctatctgaattctaaagcaaacaggaagaaacttgca
cgagctttattcaatgttccaaggacttcgttggaactgttacctttctattcccgttta
gttgccactttgtccacatgcatgaaggatctcccaagtatgctcttgtcaatgcttgaa
gaagagtttaactttttgatgaacaagaaggatcagattaaaatcgaaacaaaaattaga
aatattagatttattggggaattgtgcaaattcaatattgctccatcaggccttgttttt
agttgtttgaaggcttgcctagatgattttagccatcataacattgatgtggcctgcaat
cttcttgagacctgcgggcgctttctttatctctcacaaggaactacagttcgcatgtca
aacatgctggaaatactgaggaggttgaaaaatgtgaagaatttggatccacaccacagc
acacttgtagagaacgcctattacttatgcaaaccaccagaaagatctgccagagtctct
aaagtccggccacctctccatcagtacataaggaagctgctgttctcagatcttgataaa
acaagtgttcagcatgttcttcgtcagttacgcaagttaccttgggctgagtgcgaggag
tacctggtgaaatgttttctcaaggttcacaagggaaaatatagccaagttcatctgatt
gctcttctaactgctggtcttagtcactatcatgatgattttcatgtggctgtggtagat
gaggttctagaagagattagagttggacttgagctgaatgactatgcaatgcaacagcga
caacttgcccacatgcgattccttggggagctatataactacgagcatattgattcatca
gttatatttgacacattgtaccttattactgtatttggtcatggaacactggaacaagat
ctgcttgaccccccagaagatttcttcaggataaggatgattgttacacttctccagaca
tgtggtcactattttgatagaggctcttcaaaaagaaagcttgacagatttttgctacat
tttcaaagatatattctgaacaaagggccattgccacttgatgttgagtttgatgtgcag
gacatgtttgctgagctacggcctaacatgactaggtattcatctccagagctgttggct
tctgctctggctgagcttgaagaaaatgagaagacgaaacaatctgaaagtgctgcttct
gatgccagctgcaagagctcagcaaacaggcctgacaaaaatggcacgggccacgaagaa
gtagcagacagtgaaagctattcaggcagcagaagcatctatcgcgatggaagtgaagat
ggagattctctgtacgaagaaaactcagatgacaggtcagggaatggagtcgttgatgac
gatgacgccatgccttctggttctgatgaagaagaaagggtccaggttagacataaggtg
gtgcaagttgaccctaaggagcaagaagactttgatcgggagctgagggcccttctacag
gttagacataaggtggtgcaagttgaccctaaggagcaagaagactttgatcgggagctg
agggcccttctacaggaaagcttggagtcgcgtaagttggagccacgggtgaaatccact
ttgaatatgactgtaccgatgaaaatcgttgaggggtcaaaggactcgagagccactgaa
agagagagtggagaagagcttgcagctgaggaaaatggtaatgctgggggcggtagtgag
gtcaaggtgtgcgtcagggtgcttgtgaagaaagggcacaagcagcagacaaggcaaatg
ctcattcctggggactgctcactcgttcagagcacaaagcagcaagaggcggctctgctc
gaggagaagcaaaacatcaagcagaaaatccttgaatacaacgagagggaggaggaagaa
ttcaacgcatcatcattccaaactgggttctggggtcaaggaggaagcagcgcaggcggc
agtatcggctcagccgggcgtggttcatgggacggttcaaacagaggcggtcgcggccgg
cagcggtactacatcgccggcggtatctaccatggctatggcaggggaaggtga
DBGET
integrated database retrieval system
