Triticum dicoccoides (wild emmer wheat): 119365055
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Entry
119365055 CDS
T07278
Name
(RefSeq) transport inhibitor response 1-like protein Os05g0150500
KO
K14485
transport inhibitor response 1
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
119365055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119365055
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
119365055
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
LRR_At5g56370
LRR_4
F-box_5
F-box-like
LRR_8
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
119365055
NCBI-ProteinID:
XP_037486541
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Position
1A:complement(94937846..94942995)
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AA seq
592 aa
AA seq
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MGRGGARDGAGPAAAAAPPWHSLPDEVLEHAFSFLPAAADRGAAAAVCHGWLGAERRSRR
RLAVANCYAAAPRDAVDRFPSVRAAEVKGKPHFADFGLVPPAWGAEAAPWVAAAAEGWPL
LEELSFKRMVVTDECLEMIATSFRNFQVLRLVSCEGFSTAGLAAITEGCRNLRELDLQEN
YIEDCSSHWLSYFPESFTSLETLNFSCLEGEVNFAVLERLVSRCRNLKTLKLNNAIPLDK
VASLLRKAPQLVELGTGKFSAEYHSDLFAKLEAAFAGCKSLRRLSGAWDAVPDYLPAFYC
VCEGLTSLNLSYATVRGPELIKFISRCKNLQQLWVMDLIEDHGLAVVAGSCSKLQELRVF
PSDPFGAGQVLLTERGLVDVSASCPMLESVLYFCGQMTNEALITIAKNRPNFTCFRLCIL
EPRTPDYVTRESLDAGFSAIVESCKGLRRLSVSGLLTDLVFKSIGANGNCLEMLSIAFAG
NSDLGLHYILSGCKSLKKLEIRDCPFGNKPVLANAAKLETMRSLWMSSCSLTLGACRQLA
EKMPRLTVEIMNDPGRTCPVESLPDDSPVETLYVYRTIAGPRSDTPDYVQIV
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcggcggcgcgcgcgacggcgccggccccgccgcggccgccgcgcccccctgg
cactcgctcccggacgaggtcctggagcacgccttctccttcctccccgccgccgccgac
cgcggcgccgcggcggccgtctgccacggctggctcggggccgagcgccgctcccggcgc
cgcctcgccgtcgccaactgctacgccgccgcaccgcgcgacgccgtcgaccgcttcccc
tccgtccgcgccgccgaggtcaagggcaagccccacttcgcggacttcgggctcgtcccg
cccgcctggggcgccgaggccgcgccctgggtcgccgccgccgccgaaggctggccgctt
cttgaggagctcagcttcaagcgcatggtcgtcaccgacgagtgcctggagatgatcgcc
acctccttccggaacttccaggtcctgcgcctcgtctcatgcgagggattcagcaccgcc
ggcctcgccgccattaccgaaggttgcagaaatttaagagaacttgacctgcaagagaac
tacattgaggattgttccagtcattggctcagttactttccggaatcctttacttctctg
gaaactctgaacttttcatgcttagaaggggaggtcaatttcgctgtactcgagcggcta
gtgagcagatgccgcaacctcaagactctgaagctcaacaatgctatccctcttgacaag
gttgctagccttcttcgtaaggctccgcaactagtagaactcggaactggcaaattctct
gctgagtaccattcagatctctttgcaaagctcgaagcggcatttgcaggttgtaaaagc
ctgagaaggctctctggggcttgggatgctgtgccagattacctgccagcattctactgt
gtatgtgaaggcctcacatcactcaatctgagttatgctactgtgcgaggccctgagcta
ataaaatttattagcagatgcaagaatctgcagcaattatgggtgatggacctaatcgaa
gaccatggtctagctgtcgtggcaggctcttgcagtaaactgcaagagctgcgggtcttc
ccgtctgacccttttggtgccgggcaagttttattgactgaaagaggccttgttgatgtt
tctgccagctgccccatgttggagtcagttctctacttctgcggccagatgacgaatgag
gccctcattacaatcgcaaagaaccgtcccaacttcacttgcttccggttatgcatcctt
gagccccgtactccagattacgtcacacgggagtctcttgatgctggctttagtgccatt
gtggaatcatgcaagggccttaggcgcctctctgtgtctggccttctcacagatctcgtg
ttcaaatcaatcggtgcaaatggtaattgtcttgagatgctgtcaatcgcctttgctggg
aacagtgatcttggcctgcattatatcctctctggctgcaagagcctgaagaagctggag
atcagggactgcccatttggaaataagccggtgctggcaaatgctgccaagctggagaca
atgcgatccctttggatgtcgtcgtgctcattgaccctgggcgcatgccgacagcttgca
gagaagatgccccgccttaccgtggagataatgaacgatcctggaagaacatgccctgtg
gagtcacttccggatgatagcccggtcgagacattgtatgtgtaccggacaattgccggt
ccaaggtccgacacaccagattacgtccagattgtttaa
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