Triticum dicoccoides (wild emmer wheat): 119365319
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Entry
119365319 CDS
T07278
Name
(RefSeq) uncharacterized protein At3g06530-like
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119365319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tdc03009
]
119365319
Ribosome biogenesis [BR:
tdc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
119365319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_At3g06530
HEAT_HEATR1
BP28CT
U3snoRNP10
HEAT_Maestro
UFL1
Motif
Other DBs
NCBI-GeneID:
119365319
NCBI-ProteinID:
XP_037486837
LinkDB
All DBs
Position
2B:complement(639282361..639296580)
Genome browser
AA seq
2150 aa
AA seq
DB search
MSSIASQLQAIKSALGSAPESTRRPITRPSVLFDAKEAADIDLRAILPIALSGLEHLTGV
DERFARYSSTLFSQTSLEVNREQQTQKENDKLNKSISSYLGLLAGYLQLPAALKTLEYLI
RRYLVHVYNVDELLLCALPYHDTHAFVRIVQLVNLGNSKWTFLDGVKSSGAPPPRSVLVQ
QCIRDTSLLETLSNYAAPKKGFLHSRTVVCFCTAVIVECLGAIPKLDSNIVQRVVGYVFD
SLNPDIGADRDYKAGALMIVGVLATRATLAPKLVQDLIIFVAKAAQHDALESVDLPWLRV
TVMAIISLVQSQSVHEFRKKPLMILKDIRDFSGVLSVLSSEFNIENFVRLYVESLVDYST
SDESCHVHLIETMETIPIKNFVERIVRKVLGNCIKASRVTDNPDINRTGIWAKKIFAAIE
KKYSCELRDAIRKFLEESEINSVKGDSSSKLLSLVFDESKSMPAEISDANIWFSLDHPKA
VVRQSALSKIAKSDILKKSTANPEKFINMQDAIIRSLYDDDLSVVQAALSIEGLAAIASP
RGLLKAYDDLLVKCTDIIHKGGSKTSKACDVAVSCLEKMVMEYQVHHMEHAKDIATVVFG
LLIVHPKTLKVNLKALELAKKIQWDFYASSPLVYELTDPEAKNVPLESIASINMKNIQAF
AETFLSNPNKHVEWLADCGNRSSFSRTLFLLIVLQALLIPTEVLDKQVNLCQVCLPALKN
EWSHIQPKGDCIGDEISIDNLEKCITELVKHIFNNDTDALNARILVCIFWGLLRVQSSYV
KQNSMIDAGENIALDDLFMFFITSPDNNIFQKHLQYLVANCTGAPIQFISKYLVDEGLSA
GVQAESLLVLASICSTCALSESSSMDESLCMQLLLLFPSLIVPLSHENKDVRSSAMKFIE
GLSLVWQRLSTSVSKNGNNGKFPMSSPAFGVFLESLANQKAMISSDARFLPAYISSMLSP
SQDLMVPENLHERIDQPTKDAILNFILHSSLKLSPYGKLMVLSALKGVGTILFKAEEVKS
LFLYLLDRRSQYQSGHDSKQVLTTHETQILCLLLEVLFAVADQTNFGFDTFEALLKALKV
DGLSHEDPVAVMPCLTALQNLQPVFFENLKNDTKDKVFGLLISLFRAENLEIRNATRDAL
LRINVHASTVVKFIELVVAQGDKRGNPKRIKRSENLNRDNHFEEYFGEHPVSSILVSLLD
IIFLMKNVNERLCLLQPLCQILSKLLSDQWISGIVCQYNKGSSETLDVPSFVKETQQLVL
LTLKDIIGTLQSGHQDNLLNNGNVNLLINFIRSTEDVGTRNHGLSLIASLAKAFPQLVSE
NIIDLFVAIGDAVKQEDSHSQHVMEDLLSVLVPCWLSKTTSIEKLLQIFIKSLTDVAEHR
RVTLMMYLLRTLGENSLSTVIMYLLYTLIERGSHSLSKHKKSHCVLSLSAMSQEWEYGLA
VNMTGQYSYKLWFPCLCKLLQEIKVHQKQVLLPMLHLALQFILLKLQDTELRFELEAEEA
ANSIQNSLGTLMEEVVLCTVSVKDKKGDISGDILKEVRNNSNTVLKIITGWMHASTYFKG
ITQLLEHPEGLVKRKTLGILCETARANNMVQNKQKKERKLKRSSLSTALQVDKSSCPYFS
ELCYKILELIDRESDTSVKIAAISSLETLAKEYPSENPAYSKCLATIISHISSGDSVTSS
GLINTAGSLINVLGSKALPQLPLIMKNMLQRAHLVSCCPSGKYVHGSPRTDASLSNQSIS
MLLSVLATIQVIVQKLGEFVSPYLEEILDLVILHPECATQIDGKLDVKAADVRGLLTETV
PVRLILPPLLNLYSSATKCGDASLSLSFQMLANVVGTMDRLAVGTYHTKIYEHCLEALDL
RRQNLDSLKNINLVEQSITHTIITLTMKLTESTFRPLFLRTLEWAESEVDQSTSKRSMDR
AIVFYKLVNKLAEQHRSLFTPYFKYLLEGSVQYLSEDGVLISSKRKKKAKLGDDIVKYKD
SLSGQKLWNLRALILKSLHKCFLYDNDQKILDSSNFQTLLKPIVSQFVAEPPESLDSVPD
APSVEEVDEILVSCLGQMAVTARSDVLWKPLNHEVLMQTRSDNVRPKMLGLKVVRYMVQH
LKEEYVALVPETIPFLGELLEDVELPVKTLSQEILKEMETLSGESLREYL
NT seq
6453 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgattgcgtcgcagctgcaggccatcaagtcggccctcggctccgcgccggag
tcgactcgccggcccatcacccggccgtccgtgctcttcgacgccaaggaggccgccgac
atcgacctccgcgccatcctccccatcgccctctccggcttggagcatcttactggtgtg
gacgagaggtttgcgaggtacagtagcacgctattcagccagactagccttgaggtcaac
cgtgagcagcaaactcaaaaggaaaatgacaagctgaacaagtccatctcctcctacctt
ggccttctagctggctatctgcagcttccagctgccctcaagacgcttgaataccttatc
cgccgatacctggtgcatgtctacaacgtggatgagttgctgctgtgtgcattgccgtac
catgatacacatgcgtttgttcggattgtgcagttggtcaacttagggaacagtaagtgg
acatttcttgatggtgtgaaatcctcgggtgcacccccgcccaggagtgttctagtacag
cagtgcatccgtgatacttctttgctggagaccctttccaactatgcggcaccaaaaaag
ggtttccttcattcaaggacagtggtgtgcttttgcactgcagtaattgtggagtgcttg
ggagctatccccaagcttgattcaaatatagtgcagagggtggtgggatatgtgttcgac
tcccttaatcctgatattggggcagaccgagattataaggctggcgctctgatgattgtt
ggggtactggcaacacgagcaacactggcaccaaaacttgttcaagacttaattatcttt
gttgcaaaggctgcacagcatgatgcattggagtcggttgatttaccgtggcttcgtgtt
acagtaatggctattataagtctagttcagtcgcagtctgtccatgaattccgtaagaag
ccattgatgattctaaaagacatcagggatttttctggcgtcctttctgtattatcaagc
gagttcaacattgagaatttcgttaggctttatgttgaatcactggttgactacagtact
agtgatgaatcctgccacgtgcaccttattgaaaccatggagacaatacctatcaagaac
tttgttgaaaggattgtgcggaaggttcttggaaactgtatcaaagcatcacgggtcacc
gacaatccagatataaaccgcacaggtatatgggcaaagaagatcttcgctgcaattgaa
aaaaaatattcatgtgagctacgtgatgctatccgtaaatttcttgaggaatctgaaatt
aactcagtaaaaggggattcttcttccaagttgctcagcttagtgtttgatgaaagcaag
agcatgccagctgaaatttctgatgctaacatctggttcagtctggatcacccaaaggct
gtggtccgtcaatctgctctctcgaaaattgccaagtccgacattttaaagaaaagtact
gcaaatccagagaagtttataaatatgcaagatgcaataattcgcagtttgtatgatgat
gatctaagtgttgttcaagctgccttatccatagaaggactagccgctatcgccagtcct
cgtggccttctaaaagcatacgatgatttgctcgtgaaatgcaccgacatcattcacaaa
ggtggttcaaaaacatcaaaggcttgtgatgttgctgtttcatgtttggaaaagatggtt
atggaatatcaggtgcatcacatggaacatgccaaggacatcgctacagtagtatttggt
cttcttattgttcacccaaagaccttgaaggtaaatttgaaggccttggagctagctaag
aaaatacaatgggatttctatgcaagtagtcctcttgtttatgagctcactgatcctgaa
gcgaagaacgtgcctttggaatctatagcctccattaacatgaagaacatccaagctttt
gctgaaacttttctatcaaacccaaataaacatgtggagtggttggctgactgtggaaac
cgaagtagcttttctagaactctgttcttactcatagtattgcaagctctgcttattcct
actgaagttttggataagcaggtgaatctgtgccaagtttgtttgccagctctgaagaac
gaatggtctcacatacagccaaaaggcgattgtattggtgatgagatcagcattgacaac
cttgagaagtgcattacggaactagtgaagcatattttcaataatgacacagatgcattg
aatgctagaattcttgtctgcatattttggggtctgctaagggtccagtcttcctatgtt
aagcagaattctatgattgatgctggtgaaaatatagcgcttgatgatttgtttatgttt
ttcatcacatcgcctgacaacaatatctttcagaagcacctacagtatctggtggctaac
tgcacaggagcacctattcaatttatctcaaagtaccttgtggatgaaggtttgtctgct
ggagttcaagcagagagtcttcttgtgcttgcgtcaatttgttcaacgtgcgctttatct
gaaagtagtagtatggatgagagcttgtgtatgcagcttctacttttgttcccttctctt
attgtccctctttcccacgaaaataaggatgtaaggtcctctgctatgaaatttattgag
ggcctgtctttggtgtggcagcgcttgagcacttcggtgtccaaaaatggaaacaacggc
aaattccccatgtcatctccagcctttggtgttttcctcgagtcattggccaaccaaaag
gccatgatatcctcagatgcgagatttttacctgcttatatttcatcaatgcttagccca
agtcaagatctgatggttcctgagaatcttcacgaaagaattgatcagccaaccaaagat
gctatccttaatttcatcttgcactcttctttgaagctctctccttatggaaagctgatg
gttctgtcagccctgaaaggagtaggaaccatcttatttaaggcagaagaggtgaagtct
ttgttcttgtatcttctggaccgtcgtagtcagtatcaaagtgggcatgattctaagcag
gtcctgactactcatgaaacacaaatattgtgcttgcttttggaggttttgttcgcagtg
gcagatcaaacgaattttggttttgatacatttgaggctctattgaaagctttaaaggtt
gatggtttgtctcacgaagatcctgttgccgtgatgccatgtttaactgccctgcagaat
cttcaaccagtattctttgaaaatttgaagaacgatactaaggataaagtatttgggcta
cttatttctctgtttcgagctgagaatttggaaattcgaaatgcaacacgagatgctcta
ctgcgaattaatgttcatgcctccactgttgtgaaatttattgaattggttgtagcgcaa
ggtgataagagaggaaatccaaagagaataaagagatcagagaatcttaaccgtgataac
cattttgaagagtattttggagaacaccctgtgtcttctattctcgtttctcttctggat
attatttttcttatgaagaatgtgaatgaaaggctatgtttactccaaccactttgccag
attctatcaaagcttctttccgatcaatggatttcagggatagtttgtcaatataacaaa
ggctcttctgaaactcttgatgtacccagttttgtaaaagaaacccagcagttggtacta
ctgacactcaaagatatcatcggtacactacaatcgggccaccaagataatctgctcaac
aatggaaatgtaaacctccttatcaatttcataaggtccacggaggatgtaggaactcgt
aatcatggattgtcgttgattgcatccttagcaaaggcattcccgcagctggtttcagaa
aatattattgatctgtttgttgctattggggatgcagtgaaacaggaggatagccactcg
caacatgttatggaggatttattatctgtactagtgccatgttggctatcaaagaccaca
agtatagaaaagcttcttcagatattcattaaatctttgactgatgttgccgaacatagg
cgtgtgaccctcatgatgtaccttttgaggaccctaggagaaaatagtttgagtaccgtg
atcatgtatctactgtacacgttgattgagcggggttcacactctctttcgaaacacaag
aagagtcattgtgtcctatccttgagtgccatgtcacaggagtgggaatatggtctggca
gtcaatatgacgggccaatattcctataaattatggtttccttgtctgtgtaagctacta
caagaaatcaaggtgcatcagaaacaagttttacttcctatgctacatttggcgttgcag
tttattctacttaagctgcaagatacagagttgagatttgagcttgaagctgaggaagct
gctaattctatccagaattctcttggaacactcatggaggaagttgtgttgtgcactgtc
tctgtcaaagacaaaaaaggggacatttctggtgatattctaaaggaagtcaggaacaat
tcaaatactgttctgaaaataattacgggatggatgcatgcttcaacatatttcaaagga
attactcagttgttagaacatccagaaggtcttgtgaaaagaaagacacttggaatattg
tgtgaaactgcaagggcgaataacatggtccagaacaagcaaaagaaagaaagaaaactg
aagcgcagctctctgtctacggcactccaagtggacaagagctcttgtccttatttcagc
gagctgtgctacaagattctagagttgattgatagagagtcggacacatctgtgaaaatt
gctgctatttcttcacttgaaacactagcgaaagaatatccctctgaaaatcctgcatat
agcaagtgccttgcgacaatcattagtcacatcagctctggtgattctgtcacttcttcc
gggttaataaataccgcagggtctctgattaacgtgctaggatcaaaagcattacctcag
cttccacttatcatgaaaaatatgctgcaaagagcacatctagtgtcatgctgccctagt
ggaaaatatgttcatggttctccgagaactgatgccagcctttcaaaccaatctatcagt
atgttgctatccgtacttgcaactattcaggtgattgtgcaaaagcttggggaatttgtt
agtccatatttggaagaaatactggatctcgtgatattgcatcctgaatgtgctactcaa
attgatggaaagttggatgtaaaagcagcagatgttcggggcctactgaccgagacagtt
ccagttcggcttattcttccacctttactgaatttgtattccagtgctaccaaatgtgga
gatgcaagcctgtcattgtcgttccaaatgcttgcaaatgtagttggtacaatggatcgg
ctggctgtaggaacttaccatacaaaaatatatgaacactgtttggaagctcttgatctc
cgtcgtcagaatctggactccttgaagaatataaatttagttgagcaaagtattacccac
accattatcactctcacgatgaagcttaccgagtccacttttaggcctcttttccttcgt
actcttgaatgggcagagtctgaagttgatcagtcaacatcaaagagaagtatggaccga
gcaattgttttctacaagttggtcaacaagctcgctgaacaacacaggtccttgtttaca
ccttacttcaagtacctacttgagggatcagtacaatatctatcagaagatggtgtcttg
atcagttccaagcgaaagaagaaggctaaacttggagacgatatagtcaaatataaggat
agtttgtcaggacagaagctgtggaacttgagagcactgatactgaaatcattgcacaag
tgctttctttacgacaatgatcagaagatcctagattcctccaatttccagactcttttg
aagcccattgtttctcagtttgttgcggaaccgcctgaatctcttgattcagttccagac
gctccatcagttgaggaagtggatgaaattcttgtttcgtgcttgggccaaatggcagtg
actgcgcgatcagatgttctgtggaagcctcttaaccatgaggtgctgatgcagacaagg
agtgacaatgtccgccctaagatgctgggcctgaaggtggtgaggtacatggtccaacac
ctgaaggaggagtacgtggctctggtcccggagaccatcccgttcctgggcgaactgctc
gaggacgtcgagcttcctgtcaaaacgctgtcccaggagatactcaaggagatggagacc
ctcagcggcgagagcctccgggagtacctgtga
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