Triticum dicoccoides (wild emmer wheat): 119366182
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Entry
119366182 CDS
T07278
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03018
RNA degradation
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119366182
09123 Folding, sorting and degradation
03018 RNA degradation
119366182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119366182
03041 Spliceosome [BR:
tdc03041
]
119366182
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119366182
mRNA degradation factors
5'-3' decay
Lsm complex
119366182
Spliceosome [BR:
tdc03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
119366182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
119366182
NCBI-ProteinID:
XP_037487773
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Position
2B:770857885..770860000
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AA seq
100 aa
AA seq
DB search
MAGRKETALDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVESEREQDDPLKL
STKTRQLGLIVCRGTAVMLVSPTDGTDEIANPFLAAEGAS
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccgcaaggagacggcgctggacctggccaagttcgtcgacaagggcgtccag
gtcaagctcaccggcggccgccaagttacaggaaccttgaagggatatgaccagctgctc
aacttagtgctggatgaagcagtcgagtctgaaagagagcaagatgacccattgaagctg
tcaaccaagaccagacaacttggtctcattgtgtgcagaggcactgctgtcatgctggtg
tcaccaactgatggaaccgacgagattgccaaccccttcctcgcagcggagggggcgtca
taa
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