KEGG   Triticum dicoccoides (wild emmer wheat): 119366182
Entry
119366182         CDS       T07278                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03018  RNA degradation
tdc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119366182
  09123 Folding, sorting and degradation
   03018 RNA degradation
    119366182
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tdc03019]
    119366182
   03041 Spliceosome [BR:tdc03041]
    119366182
Messenger RNA biogenesis [BR:tdc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     119366182
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     119366182
Spliceosome [BR:tdc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    119366182
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 119366182
NCBI-ProteinID: XP_037487773
LinkDB
Position
2B:770857885..770860000
AA seq 100 aa
MAGRKETALDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVESEREQDDPLKL
STKTRQLGLIVCRGTAVMLVSPTDGTDEIANPFLAAEGAS
NT seq 303 nt   +upstreamnt  +downstreamnt
atggcgggccgcaaggagacggcgctggacctggccaagttcgtcgacaagggcgtccag
gtcaagctcaccggcggccgccaagttacaggaaccttgaagggatatgaccagctgctc
aacttagtgctggatgaagcagtcgagtctgaaagagagcaagatgacccattgaagctg
tcaaccaagaccagacaacttggtctcattgtgtgcagaggcactgctgtcatgctggtg
tcaccaactgatggaaccgacgagattgccaaccccttcctcgcagcggagggggcgtca
taa

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