Triticum dicoccoides (wild emmer wheat): 119366346
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Entry
119366346 CDS
T07278
Name
(RefSeq) eukaryotic initiation factor 4A-III homolog B-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03013
Nucleocytoplasmic transport
tdc03015
mRNA surveillance pathway
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119366346
09122 Translation
03013 Nucleocytoplasmic transport
119366346
03015 mRNA surveillance pathway
119366346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119366346
03041 Spliceosome [BR:
tdc03041
]
119366346
03009 Ribosome biogenesis [BR:
tdc03009
]
119366346
03012 Translation factors [BR:
tdc03012
]
119366346
Enzymes [BR:
tdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119366346
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119366346
mRNA cycle factors
Stress granule specific factors
119366346
Spliceosome [BR:
tdc03041
]
Complex C
Other components
EJC/TREX
119366346
Ribosome biogenesis [BR:
tdc03009
]
Eukaryotic type
90S particles
Helicases
119366346
Translation factors [BR:
tdc03012
]
Eukaryotic type
Initiation factors
eIF-4
119366346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
AAA
Helicase_RecD
Utp25_C
TniB
Motif
Other DBs
NCBI-GeneID:
119366346
NCBI-ProteinID:
XP_037487969
LinkDB
All DBs
Position
2B:complement(789566922..789571162)
Genome browser
AA seq
407 aa
AA seq
DB search
MAAAAAAAAGSSRRGPMDDDKLSFETSAGVEVVGSFDAMGIREDLLRGIYGYGFEKPSAI
QQRAVVPIIAGRDVIAQAQSGTGKTSMVSLSVCQLVDTNIHEVQALILSPTRELATQTER
VMQAVGNYMSVSVHACVGGKSIGEDIRKLEAGVHVVSGTPGRVCDMIKRRTLRTRAIKLL
VLDEADEMLTRGFKDQIYDVYRYLPPELQVVLISATLPHDILEITSKFMTDPVRILVKRD
ELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMRTNNFTV
SAMHGDMPQKERDAIMSEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHR
IGRSGRFGRKGVAINFVRKDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcggcggcggcggggtcctccaggcgcgggccgatggacgacgac
aagctcagcttcgagacctcggcgggggtggaggtcgtggggagcttcgacgcgatgggc
atccgcgaggacctgctccgcggcatctacggctacggcttcgagaagccctccgccatc
cagcagcgcgccgtcgtccccatcatcgccggccgcgacgtcatcgcccaggcccagtcc
ggcaccggcaagacctccatggtctccctctccgtctgccagctcgtcgacaccaacatc
cacgaggtgcaagcattgatactgtcaccaactagggaacttgccacgcaaacagagagg
gtgatgcaagctgttgggaactacatgagtgtgtctgtgcatgcctgtgtcggtggcaaa
agtatcggtgaggatattaggaagcttgaggctggagtgcatgttgtttcgggaacccca
ggcagggtatgtgatatgatcaagagaaggaccttgcgcacaagagccatcaagctgcta
gtcctggatgaagccgatgagatgttgaccagaggttttaaggatcagatctatgatgtc
tacagatacctccccccagaacttcaggttgtcttgatctctgcaactctgccccatgac
atcttggagataactagcaagttcatgactgatccagtcaggatccttgtaaagcgtgat
gagttgaccctagagggcatcaaacaattctttgttgctgttgagaaggaggaatggaag
tttgatactctgtgcgatctttatgatacactgaccatcactcaggctgtcattttctgc
aatactaagagaaaggtggattggcttactgaaaggatgcgcaccaacaactttaccgta
tcagctatgcatggtgacatgcctcagaaggaaagggatgcaatcatgagtgagttcagg
agtggcacgacccgtgttctgatcacaacagatgtttgggctcgagggctggatgttcag
caggtctctcttgtcattaattatgatctcccgaataaccgtgagctttacatccatcgc
atcggccgctctgggcgttttgggcgcaagggtgtggcgatcaactttgtgcgcaaggat
gacatccgtatcctgagggacattgagcagtactacagcacgcagatcgacgagatgccg
atgaacgtcgccgatctgatctga
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