Triticum dicoccoides (wild emmer wheat): 119366392
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Entry
119366392 CDS
T07278
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119366392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119366392
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
119366392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Zn_ribbon_RanBP
Vps36-NZF-N
AAA_22
Phospholamban
Motif
Other DBs
NCBI-GeneID:
119366392
NCBI-ProteinID:
XP_037488015
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Position
2B:complement(797308691..797314333)
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AA seq
716 aa
AA seq
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MFVPKTDNQSDLEGPHRNAGPWLCSICSQQNDTSCMSCEVCGVLRDLSLYFNNSNEPEGG
AKRRNKHSGVSVLARSLFAPSGPKSKAVVFSDGFRGNKNATGHMQASLGTLHKTYMTHKQ
RHNIVPFKFDIPSPDDMVSTGLKSSRHLRKAVPSVDIPGKMVMGDDDLVVEKDTSTDPSS
SVKLDELGGNSSTVAANTQNETLILDNELQHLSLERKPKNSKTKIKKPVPVSQYKPEPWM
LQGEDQDMPRQLNLAIVGHVDSGKSTLCGRLLHALGRISKKQMHKNEKEAKEKGKGSFAY
AWAMDDSADERARGITMNVGVAYFDTKNYQVVMLDSPGHKDFVPNMISGVTQADAAVLVV
DASLGSFESGMGVNGVGQTKEHSQLIRSFGVENLIVAVNKMDSVEYSAERFNYVKSQLGI
FLRSCGYKESAITWVPLSAMENENLVTAASDTRLSSWFHGTCLLEAIDSSAPPPRDVSRP
LRLPICDVISSHVLGQVAVCGKVVCGAIGSDSKVLVMPSGELATVKIIERDSSRLSSARA
GDNIAIGLQGIDPIHVMSGGVLCHPDYPVSVASSLELKILVLDITVPILPGLQFELHVHH
AKVSASLVRIVSLLDQKTGKASAKKPRMLTARQAAIIEVRRVTCAPLQQMSLNECLVIVC
GACFVQVKLEREVCVEEFATLKALGRAFLRSQGSTVAVGVVTRVVQVQGERAEQAS
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcctaaaacagataaccaatctgatctcgaggggccgcatagaaacgctggg
ccgtggctgtgctccatttgctcgcagcaaaatgatacgagctgtatgtcctgtgaggta
tgcggcgttcttcgggatttgtcactgtatttcaataactccaatgaacctgaaggtgga
gctaaacgtagaaacaagcattctggtgtatctgtactggcaagatctcttttcgcacca
tctggtccaaaatcaaaagccgttgttttctccgatggatttcgaggcaacaaaaacgca
acaggacatatgcaagcttccttgggtactctgcacaagacatacatgacacataagcag
cgccataacatagtgcctttcaagtttgatataccatctcctgatgacatggtctctaca
ggcttaaaatcgtccagacatttgcgaaaagctgttccatctgtagatatccccggaaag
atggtgatgggtgatgatgatcttgtagttgagaaggatacaagtacagacccaagttca
tcagtgaagttggatgaacttggtggaaatagtagcactgttgccgccaatactcagaac
gaaactcttattttggacaatgagctacaacatttgagtttagagaggaagccaaaaaac
agtaaaaccaagattaagaagccagttcctgtttcacaatacaagccagaaccgtggatg
ctacagggcgaagatcaagacatgcctagacaactaaatcttgctattgttggtcacgtt
gattctggcaaatcaacattatgtggtaggttgctgcatgccctgggtagaatttcaaaa
aagcaaatgcataagaatgagaaagaagcgaaagaaaagggaaaagggtcgtttgcatat
gcttgggcaatggacgacagtgctgatgaaagggcacgtggcattacgatgaatgtcggt
gtagcatactttgacaccaaaaattaccaagttgttatgctcgactcccctggtcacaag
gatttcgttcctaacatgatatctggagtgacgcaagctgatgcagctgtcctagttgtt
gatgcctctcttggatcattcgagtcaggcatgggcgttaatggggttggtcagacaaag
gagcactcacagcttattcgaagctttggtgtcgagaacttgatagttgctgtcaataag
atggattcagtggaatattcggcagaacgcttcaattatgtgaaatcacaacttggcatt
tttctccgatcttgtggctataaagagtcagcgataacctgggttcctttgagtgcgatg
gaaaatgaaaatctggtgacagcagcttcagatactcgtctctcatcatggtttcacggg
acttgccttctggaagcaattgactcgtcagcaccacctcctcgtgatgtttcaaggcca
ctacggcttccaatttgtgatgttatttcatcccatgtgctggggcaagtggcggtttgt
ggtaaagtggtgtgtggagcaatcggaagtgattccaaggtccttgtgatgccttctgga
gagctagctacagtgaaaatcatcgagcgggactcctctcgtctcagctcggcaagagcc
ggcgacaacattgcgattggactgcaagggatcgacccgatccatgtgatgtctggtgga
gttctgtgccatccggattaccccgtgtcggtggcgtcttccctggagctgaagatcctg
gtgctagacatcaccgtacctatactgcccggccttcagtttgagctccatgtgcaccac
gcgaaggtgtcggcgtccctggtgagaatcgtgtcactgctggaccagaagactggcaaa
gcctcagcgaagaagccgcggatgctcaccgctagacaggctgccatcatcgaggtacgt
cgcgttacatgtgcgcccttacagcagatgagtctgaatgagtgcctggtgatcgtctgt
ggtgcctgttttgtccaggtgaagctggagagggaggtgtgcgtggaggagttcgcgacc
ctcaaggccctgggccgggcgttcctgcggtcgcaggggagcaccgtcgcggtcggcgtc
gtgacccgcgtcgtgcaggtacagggggagcgagcagagcaggcttcttag
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