Triticum dicoccoides (wild emmer wheat): 119366466
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Entry
119366466 CDS
T07278
Name
(RefSeq) uncharacterized protein LOC119366466
KO
K13126
polyadenylate-binding protein
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03015
mRNA surveillance pathway
tdc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119366466
09123 Folding, sorting and degradation
03018 RNA degradation
119366466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119366466
03041 Spliceosome [BR:
tdc03041
]
119366466
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
119366466
mRNA cycle factors
Stress granule specific factors
119366466
Spliceosome [BR:
tdc03041
]
Complex C
Other components
Complex C specific factors
119366466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_10
RRM_7
Nup35_RRM_2
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
119366466
NCBI-ProteinID:
XP_037488103
LinkDB
All DBs
Position
2B:complement(806643199..806647941)
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AA seq
957 aa
AA seq
DB search
MGCKSDLADQPQEDGMSAVPAESEEGSEEEEPFEREFYDDDDDDEEDDNDSEPETQAVDS
CEDPLAEEEEVSGEEPCDVAAPLEDEDASYEEPFVSELCYEEEDSDEQDSYYPEPLTDSY
RMQLYEVEPCDDQVAQEYEFVKKKSSTVQTINKERNMKVVLKRALRKGSSNEHKAVPVID
DMEMRPLKKPLSVRFATDVSCYTYSTESFGPAKLVKRKAQFDDQDSHLRKRQEYILSSLK
DGCKLKEVDDTNLYVGNLPTSVTSHKLIELFLPFGRIVRSKVADDRFTGVSQGYGFVKYA
EPRSATAAIERMNGRLVDGKTLEVRVAGPPTSVSHPSKQSVSETCSLPSKEIDSSSLYVS
HLPLSMDTLKLLNHFRPFGKVTEIKVPKDHTTGLSKGYGHVKYADSRDAAQAIIHLNGVL
VEGKRIEVRLSDISPTLSNSAVGSHTNTRTIKEIDMANLYVCNIPASVDTNKLIELFLPF
GKITHARVAADQGAHSGKGYGFVKFADSQCAAEAIALMNGALVEGETLIVRVAGLSSSAS
SSSAVQGSPTASPEINKSRLYITNLPQTMNADKLVELFVPFGRISKVVINPEYSLVYYAD
AASAITAAEHMDGYLIGGKRLVVRGSDSSCQTNAAEQALSLPAGKPAKEIDMANVYVGSI
PPTVTGDQLVELFRPFGQIVQSRLFHGYGMVRYSHPSCATAAIDHMDGYQIGGRTLVVRV
AGLPNPGDCLTLPEPGNEQRQIDMTNLYVCHLPLHVTTEKLIEIFLPCGQITQAKVVIDW
HTGASRGFGFVKFADAYGAAVALTHMNGCPLEGRILGVRIAGVHPSDMGSYMARLYSRFT
LPDPTTMAVGIPTSSYWPYYCAESAYAEGQGADAASQTSQEESVSAGSFAEKGCSSVSSH
VADSSRQHSSAGWAGPPGFSPHAGPKKDTATVMKPSQPCSKVHLAQSGGSQKRRSIV
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgggatgcaaaagtgacctggctgaccagccacaggaggatggcatgagtgctgtccct
gctgaatctgaagaaggcagtgaagaagaagagccatttgaacgtgaattctacgatgat
gatgatgatgatgaagaagacgacaatgatagtgagccagaaacacaggctgtggattct
tgtgaagatcctttggcagaagaggaagaggttagtggtgaggaaccttgcgatgttgcg
gctccacttgaagacgaggatgccagttacgaggaaccttttgtttcagaactctgttat
gaggaagaagacagtgacgagcaggactcgtattatccggagcctctcactgattcatac
aggatgcagctctatgaagtggagccatgtgatgatcaggtggctcaagagtacgaattt
gtgaagaagaagtccagtactgtgcagactatcaacaaggaacgaaatatgaaagtcgtc
ctaaaacgggcactgagaaagggtagcagcaatgagcacaaggcggtaccagtgattgat
gatatggaaatgaggccgttgaagaaacctttatctgtcaggtttgctactgatgtatct
tgttacacatacagtactgaaagttttggtcctgccaagttagtaaaaaggaaagctcag
tttgatgaccaggatagccacttgcgtaagaggcaagaatacatactctcctcgcttaag
gatggttgcaagctgaaagaagtggatgacactaacctgtatgtgggtaacctgccaact
tctgtgacttctcacaagctcatcgagctatttcttcctttcggacgaattgtccgatca
aaagtggcggatgatcgtttcactggtgtaagccagggatatggctttgtgaagtatgct
gaacctcgtagtgccacagcagctattgaacgcatgaatggccgcctggttgatgggaaa
acattagaggttagagtagctggacctccaacatcagtatcccacccatcaaagcaatct
gtgtcagaaacttgcagtctgccctcaaaggaaatcgactcgagtagcttgtatgtcagc
cacctccccttatccatggacacgctaaagctactcaaccattttcggccgtttgggaaa
gtaactgagataaaggtacccaaagatcacaccacaggtttaagcaaaggatatggtcat
gtgaagtacgctgattctcgtgatgcagctcaggccatcatccatttaaatggagttctt
gttgagggtaaaaggatagaggttcggttgtctgacatctctccaacactgtcaaattca
gctgtgggatcacacaccaataccagaaccatcaaggaaatcgacatggcaaatctatat
gtctgcaacattcctgcatccgttgatacaaataagctgattgagcttttcttgccattt
ggtaagatcacccatgcgagagtggcggcagaccaaggcgctcattccggtaaaggatat
ggctttgtcaaatttgctgattctcaatgtgctgccgaggctattgcactaatgaatgga
gcactggttgaaggggagacattaattgtcagagttgcaggcctttcatcatcagcatcc
tccagctcagctgtacaaggctcaccaactgcctctccagaaatcaacaaatctagactg
tacatcactaaccttccacagaccatgaacgcagataagttggttgaacttttcgtgccc
ttcggtcggatcagcaaagtcgtgatcaatccggagtatagcctagtgtactatgcagat
gcagcgtcagcgatcacggctgccgaacacatggatgggtacctgattggtggaaagagg
ctagttgtcaggggatcagactcctcttgtcaaaccaatgcagcagagcaagctttatca
ctgccagctggcaagcccgcgaaagaaattgatatggccaatgtgtatgttggcagcatc
ccgccaacggtaaccggcgatcagttggtcgagcttttccgaccttttggacaaattgtg
caatctaggctgttccatgggtatggcatggtcaggtacagccacccttcatgtgctact
gctgcaattgatcatatggatggttaccaaattggaggacgtaccctggttgtgagagta
gcaggccttcctaatcccggggattgtctaacactaccggagcctgggaacgagcagagg
caaattgacatgaccaacctatatgtctgccatctcccgctccatgtaaccaccgaaaag
ctgattgaaatctttctgccatgcggccaaatcactcaagcaaaggtggtcatcgactgg
cacactggtgcgagcaggggattcgggtttgtcaaatttgctgatgcttatggcgctgct
gtggctctcactcacatgaacggttgcccgctggaggggcgcatcttgggggttagaata
gccggtgtccatccgagtgatatgggcagctacatggcgcgtctctactcccggttcaca
ttgcctgaccccacgacgatggcggttggaataccaacatcatcgtactggccatactat
tgtgctgaatcggcatacgcggaggggcagggagctgatgctgcttctcaaacatctcag
gaggaatctgtatcggccggttcatttgccgagaagggttgttcttctgtgtcaagccat
gtcgccgacagttctcggcaacattcttcagcaggttgggctggtccgcctggtttcagt
ccccatgctggccccaagaaggataccgccactgtgatgaaaccttcccagccttgctcc
aaggtccatttggcacagtcaggaggcagccagaaaagacgctcaattgtctag
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