Triticum dicoccoides (wild emmer wheat): 119366503
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Entry
119366503 CDS
T07278
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2 isoform X1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119366503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119366503
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
119366503
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
119366503
NCBI-ProteinID:
XP_037488143
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Position
2B:810356842..810372966
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AA seq
203 aa
AA seq
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MVGASTSSVVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQ
EHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVA
VWWRPNFETVMYPYCPPHITKPKECKKLFIVHLTEREYFAVPRNLKLLAVPLFELYDNVQ
RYGPVISTIPQQLSRFQFNMVSS
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcgcctcgacgtcgtcggtggtgaacgtgtacccgctcgccaactacacgttc
ggcaccaaggagcccaagatggagaaggacacctccgtcgccgaccgcctcgcccgcatg
aaggtcaactacatgaaagaaggaatgcggacaagtgttgaagcaatcctactggtgcaa
gagcacaatcacccacacatactgttattgcaaattgggaatacattttgcaaacttcct
ggtggacgtttgaagcctggagaaaatgaaattgagggcctgaaaagaaagttgtgcagc
aaacttgcagtgaactcaccttcctttccacctaactggcaggttggtgagtgtgttgct
gtttggtggaggccaaactttgagaccgtgatgtatccttattgccctccacatataacc
aagcccaaggaatgcaagaagcttttcattgttcatctaactgaaagagagtatttcgct
gttccaagaaacttgaagctacttgctgttccactgtttgaactctatgacaatgttcag
cggtatggacctgtaatttccaccatcccgcagcagctgtctaggttccagttcaacatg
gtgagctcgtaa
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