Treponema denticola: TDE_0056
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Entry
TDE_0056 CDS
T00157
Name
(GenBank) DNA-directed RNA polymerase, omega subunit, putative
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
tde
Treponema denticola
Pathway
tde03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tde00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TDE_0056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tde03021
]
TDE_0056
03400 DNA repair and recombination proteins [BR:
tde03400
]
TDE_0056
Enzymes [BR:
tde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TDE_0056
Transcription machinery [BR:
tde03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TDE_0056
DNA repair and recombination proteins [BR:
tde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TDE_0056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Sigma_reg_N
Motif
Other DBs
NCBI-ProteinID:
AAS10554
UniProt:
Q73RN2
LinkDB
All DBs
Position
65846..66052
Genome browser
AA seq
68 aa
AA seq
DB search
MIFPLKELIEFDDNIYEITCASTRRAYQLAKIQDPNVEKSGDKVVSAGAKQIFTGEVNYQ
IERHPEFN
NT seq
207 nt
NT seq
+upstream
nt +downstream
nt
atgatatttccattaaaagaactcatcgagtttgatgacaatatttacgagattacatgt
gcatcgacaagaagggcctatcagctggctaaaatccaagatcccaatgtcgaaaaaagc
ggagacaaggttgtttcagccggagcaaagcaaatttttaccggtgaagtaaactatcag
atagagcgtcaccccgaattcaactaa
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