Treponema denticola: TDE_0171
Help
Entry
TDE_0171 CDS
T00157
Name
(GenBank) nuclease SbcCD, C subunit, putative
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tde
Treponema denticola
Brite
KEGG Orthology (KO) [BR:
tde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tde03400
]
TDE_0171
DNA repair and recombination proteins [BR:
tde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TDE_0171
Archaeal homologous recombinant proteins
TDE_0171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_27
Motif
Other DBs
NCBI-ProteinID:
AAS10668
UniProt:
Q73RB9
LinkDB
All DBs
Position
200105..203197
Genome browser
AA seq
1030 aa
AA seq
DB search
MKPEILKLTNIGPFRGTHTIDFSLMDSIFLVCGKTGAGKTTIFDAISYAFYSKPLGSRSQ
ITRSLRSQFAPEEETAEVELVFTMGPAKYRIFRRLPFLRPGKKNETPEESALAQWDGKTW
KDLSSTNKRDTDKKILNIINLNEKEFARIVLLPQGEFAAFLRENSSQKKETLEELFPISR
YTKIMENLKEREKAESYKIKNTQDALEALGKEFDADSYPSKKEGFEKEIELIKKNYNKIS
KKIEEKISEKEQAKVLKEKKEELVTIKTRLENLNAHKEEIGLMEEAVEKARRAASLAALA
DSVSKLKNNIAEYKTDIEKKIKDLNAVTQVLDSLKAQEKEIEAEKENNTALKQSLDRLKR
AAEVYKEIEERSYEKKGLSLQKKENTEKLAQTEKNIQELKDKVSEYLEIISELDNRKEMA
ETSTQKLSYLKRLFDIAVKKEKASKLYTTHKAAAEKNYNDLQLILKDIEIEKELFEKLKK
EKKDLEINAEASALAVHLKDGEPCPVCGSIHHPSPAVENTESIFSLDEKIQKCERSIEKF
NLDKDSLSNSLTARNKDADWHKEQLAELDRSFFNLNEEFKNTSFIFEEMPSEKTIEDLLP
QAGKEAEKDSLLFKEAQTANTAKINLEQKLSSIQTQKEALTDALTNIKIKESELNTILHE
KKKQYDDAFKSIPSDIQKENIDDTIEGCNEMIFASDRKISGYEEKLKENNDRHTSIKAGL
IQRQEQLAKWEKSLLEEEENLKDSFERKGFSSLKELLDSILPEEKISDFEETITKFKEEK
ITLEHSAAGLKKDIEGKTFIQPEKIEDEIIILQKNLDEEQDRLAEIKSSLDKLKDLFERR
QSLLKELKQRAEEAQLITELSLSLNGSNKYKLKFNIWMLSAFLREIIVYANTRLERMSGG
RYVLKLSKELSGNNLSGLDMEIYDAYTGGIRPTASLSGGETFMVSISLALGLADSIQTRS
GGIRLDSMFIDEGFGSLDEASLENAISILDEVRGNRMVGIISHVSELKTRIPQKIEIEKN
SNGSTIKIRG
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcctgaaattttaaaactaaccaatataggcccctttcgaggaacccacacaata
gattttagcctcatggattctatttttttggtatgcggaaaaaccggtgccggaaaaaca
accatcttcgatgcaatctcttatgccttttattcaaagcctttggggagccgctcccaa
attacccgcagcctcagaagtcagtttgcccccgaagaggaaacggccgaggttgagctt
gtatttactatgggacctgccaaatacaggatttttagaaggctcccttttttacgcccg
ggaaagaaaaacgaaacgcctgaagaatcggccctagctcaatgggacggcaaaacttgg
aaagatttaagctctacaaataaaagggacacggataaaaaaatattgaacataataaac
ctaaacgaaaaagaatttgcccgcattgtcctcctcccccaaggcgaattcgccgctttt
ttacgcgaaaactcaagccaaaaaaaagaaacccttgaagagctttttccgatttcccgc
tacaccaaaataatggaaaatctaaaggaaagagaaaaagcggagtcctataagataaaa
aacacgcaagatgcccttgaagccctcggaaaagaattcgatgccgattcctatccttca
aaaaaagaaggctttgaaaaagagatagaacttatcaaaaaaaattataacaaaatatca
aaaaaaatagaggaaaaaatctccgaaaaagaacaggcaaaggttctcaaagaaaaaaaa
gaagaacttgtaacaataaaaacaaggctcgaaaatcttaatgcccataaagaagaaata
ggcctgatggaagaagcagtcgaaaaagcccgcagagccgcctctcttgcagcgcttgcc
gattccgtaagcaaactgaaaaacaacatagccgaatataaaaccgacatcgaaaaaaag
ataaaagacctaaatgccgtaacccaagttttggattctcttaaagcacaagaaaaagaa
atcgaagccgaaaaagaaaacaatacggccctaaagcaaagcctcgaccgcctcaaaagg
gctgccgaggtatacaaagaaatagaagaacgctcttatgagaaaaaaggtctttcttta
caaaaaaaagaaaataccgaaaaacttgctcaaaccgaaaaaaacattcaggaactaaaa
gacaaagtttcggaataccttgaaataatcagcgagctcgataacagaaaggaaatggct
gaaacctcaacccaaaaactttcttacctaaaaagactttttgatattgcggtaaaaaaa
gaaaaagcctcaaagctctacacaacccataaggcggccgccgaaaaaaactacaacgat
ttacagttaattttaaaggacatcgaaatagaaaaagagctttttgaaaaacttaaaaaa
gaaaaaaaagatttggaaataaacgcagaagcctcagcccttgccgttcacttaaaagac
ggagagccatgtcctgtctgcggctcaatccatcatccttcccctgccgtcgaaaatacg
gaaagtattttttctctggacgaaaaaatacaaaaatgtgaacgcagcatcgaaaagttt
aatctcgataaagactctctaagcaacagcctcacagcccgcaataaagatgcggactgg
cataaggagcagctggcagagcttgaccgctcttttttcaatctgaatgaagaatttaaa
aacacttcctttatttttgaagagatgccctcggaaaaaacaatagaagaccttcttccg
caagccggaaaggaagccgaaaaagactctcttctttttaaagaagcccaaaccgcaaat
actgcaaaaataaatttggagcaaaaactttcttctattcaaacccaaaaagaagctcta
acagatgctcttacaaatatcaagataaaagaaagcgagttaaacacaatcctccatgaa
aagaaaaagcaatatgatgatgcctttaaatctatcccctccgatatccaaaaagaaaat
atagatgacactatcgagggctgtaatgaaatgatttttgcctccgaccgtaaaataagc
ggttatgaggaaaagctcaaagaaaacaatgaccgtcatacaagcataaaggcggggctt
attcaaagacaggaacagttggccaagtgggaaaaatctttattggaagaagaagaaaat
ttaaaagattcttttgagcgtaaaggcttttcctccttaaaagagcttttagattctatt
ttgcccgaagaaaaaatctccgattttgaagaaaccataacaaaatttaaagaagaaaag
attaccttggaacattccgccgccggcctcaaaaaagatattgaaggcaaaacttttatt
cagcccgaaaagattgaagacgaaattataatcttgcaaaaaaatcttgatgaagaacaa
gaccgccttgcagaaataaaaagctccctcgacaagctcaaagacctttttgaaagacga
cagagccttttaaaggaattaaaacaaagagcagaagaagctcaacttataaccgagctt
tctttaagtttaaacggcagcaataaatacaaactgaaattcaatatttggatgctctcg
gcctttttgcgcgaaataatcgtctatgccaacacccgtcttgaacgcatgagcggaggc
cgctatgtcttaaagttgagcaaggagctttcgggcaacaatctttccggattggacatg
gaaatttatgatgcctatacgggcggcatccgtcctacagccagtctttcgggaggagaa
acctttatggtttccataagcttagccctcggccttgccgactccattcaaacaagaagc
ggaggcataaggcttgattcaatgtttatagatgagggcttcggcagcctcgatgaagca
agccttgaaaacgccataagcattctcgatgaggtaaggggtaaccgcatggtcgggata
atttcccatgtcagcgagctaaaaacccgcatcccccaaaaaatcgaaatagaaaagaac
tccaatggttctacaataaaaataagaggttaa
DBGET
integrated database retrieval system
