Treponema denticola: TDE_0295
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Entry
TDE_0295 CDS
T00157
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
tde
Treponema denticola
Brite
KEGG Orthology (KO) [BR:
tde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tde03032
]
TDE_0295 (gyrA)
03400 DNA repair and recombination proteins [BR:
tde03400
]
TDE_0295 (gyrA)
Enzymes [BR:
tde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TDE_0295 (gyrA)
DNA replication proteins [BR:
tde03032
]
Prokaryotic type
DNA Topoisomerases
TDE_0295 (gyrA)
DNA repair and recombination proteins [BR:
tde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TDE_0295 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
TF_AP-2
Motif
Other DBs
NCBI-ProteinID:
AAS10790
UniProt:
Q73QZ8
LinkDB
All DBs
Position
complement(324310..326757)
Genome browser
AA seq
815 aa
AA seq
DB search
MEEIQTKEGGAVIPIPIENEVKRAYIDYSMSVIVSRALPDVRDGLKPVHRRILYSMEEKG
LRSSGPTRKCAKIVGDVLGSYHPHGDASVYDALVRLGQDFSLRYPVIYPQGNFGTIGGDP
PAAYRYTEAKMAKIAETMVEDIKKETVDFIPNFDDSTKEPTVLPAKFPFLLANGSSGIAV
GMATNMPPHNLREIADAVSAYIDNPEIEIDELCKYMKGPDFPTGGVIYGRKGIKQAFKTG
RGKILVRGKFTIEVDKKGKETIVFTEVPYQVNTTTLVSRIGELAREKIIDGIANVNDETS
DRTGLRVVIELKRGAITKVVLNQLFAKTALQSSFGVINLALVNGRPETLNLKLLVKYFVE
HRVDVVTRRTKFDLRKAEERAHILEALIVAIDNIDEVIKIIRSSRDPQTAKNNLMERFGF
DDVQAQAIVDMQLKRLTSLEIEDLRKELQELQVLIAHLKDLLAHPEKILALIKEETNEIA
EKFGDERKTDIVADEVEELNIEDLIKKEEMVILISHLGYIKRIPATAYKSQNRGGKGSNS
VNLAEDDFLDQIFTASTHDYIMFITNAGKAYWLKVHEIQEASRTSRGSHIKSLLSVSSDE
EITAVVSLKEFDDKTYLLMATAGGVVKKVTTDNFANAKTRGIIAIKLDEGDKLVSAILTG
GKDEIMLITRRGQALRTSEEDIRSQGRSSRGVTGIKLSSEDELTGALRVTENQKMLVMTE
NGYGKRVEFSEFSAHGRGTGGQRIYTLSEKTGEVVGLLTVFDDDEVVCITGQGKTIRISV
DSVGTMGRSAQGVRILDIESPDMLIGLDVVARDEE
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
gtggaagagatacaaactaaggaaggcggagccgtaattccgattcctatcgaaaatgaa
gtaaaaagagcctacatagattattcaatgtcagttatcgtaagccgagccctgcccgat
gtaagggacggtctaaagcccgttcacagacgtatcctttattcaatggaagaaaagggc
ttacgcagttcaggccccacccgaaaatgtgctaagatcgtaggtgatgtattaggaagt
taccaccctcacggcgacgcttcggtctatgatgccctcgtccgccttggacaggacttc
tctctccgctatccggttatttatccccaaggaaacttcggaaccataggaggcgacccg
cccgcagcttaccgatacacggaagctaagatggccaaaatagccgaaaccatggtcgag
gatataaaaaaagaaacagtcgattttattccgaactttgacgattctacaaaagaaccg
accgttcttccggctaaatttcccttcttgcttgcaaacggttcaagcggaattgccgtc
ggtatggcaaccaatatgccgccccacaacttacgcgaaatagccgatgcggtttcagcc
tacatagacaatcccgaaatcgaaatagacgagctttgtaaatatatgaagggtcccgac
ttcccgacaggcggagttatctacggacgaaagggaataaaacaagcctttaaaacaggc
cgcggaaaaatattggtacgcggtaaatttacaatcgaggtcgataaaaaaggaaaagaa
acaatagtctttaccgaagtaccctatcaggtaaacacgaccacccttgtatcccgtatc
ggggaactggcccgcgaaaaaattatagacggaatcgcaaacgtaaacgatgaaacttcg
gatagaacaggcttgcgagttgttatagagctaaagaggggggctattacaaaggttgtt
ttaaaccagctttttgcaaagactgcccttcaatcttctttcggagttataaacctcgct
cttgtaaacggaaggcctgaaacccttaacttaaaacttcttgtaaaatactttgtcgag
cacagggtcgatgtagttacccgcagaacaaaattcgatttgcgtaaggcggaagaaaga
gctcatatcttggaagccctcatcgtcgccatcgacaatatagatgaagttatcaaaata
ataaggtcatcccgagatccgcaaacggcaaaaaacaacttgatggaaaggttcggcttt
gatgatgttcaagctcaggccatagtcgatatgcagctaaagcgtttaaccagcttggaa
attgaagacctccgaaaagagttacaggaattacaggttctaatcgctcacttaaaggac
ctccttgcccaccccgaaaagattttagctctaataaaggaagaaactaacgagatagcc
gaaaaattcggagatgagcgcaagaccgatatagtagccgatgaggttgaagaactcaat
atcgaagaccttattaaaaaagaagagatggttattttaatttcccacctcggatatatt
aagcgtattcctgccacagcctataagagccaaaatagaggcggcaagggttccaattcc
gtaaaccttgccgaagatgactttttggatcagatttttacggcctcaacccatgactat
attatgtttatcacaaatgcgggaaaggcttactggttaaaggtgcatgaaatacaggaa
gccagcagaacaagccgcggctctcacataaaatcccttctttccgtttcttccgatgaa
gaaattacggctgttgtttccttaaaagaattcgacgataagacctatcttttgatggca
acagcaggcggtgttgtaaaaaaagtaacaaccgataattttgcaaatgcaaaaacccgc
ggaatcatagcgataaaactcgatgagggcgataaacttgtaagtgcaattcttacaggc
ggcaaggacgaaatcatgctgattacccgccgaggtcaagccctccgcacaagcgaggaa
gacatccgctctcaagggcgttcttcccgcggtgttaccggaataaagctttcttctgag
gacgaacttacgggcgcactccgagtgacggaaaatcaaaagatgcttgttatgaccgaa
aacggctacggtaagcgcgtggagttttccgaattttcagctcatggaaggggaaccgga
ggacagcgtatctataccctctctgaaaaaacgggagaggttgtagggcttcttaccgtc
tttgatgacgatgaagttgtctgcataacgggccaaggaaaaacaatccgcataagcgta
gactctgtcggcactatgggaaggtctgcacagggtgtaagaatattagatattgaaagc
cccgatatgcttatagggcttgatgttgttgcccgcgatgaagaatag
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