Treponema denticola: TDE_0435
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Entry
TDE_0435 CDS
T00157
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tde
Treponema denticola
Pathway
tde03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tde00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TDE_0435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tde03019
]
TDE_0435
03400 DNA repair and recombination proteins [BR:
tde03400
]
TDE_0435
Enzymes [BR:
tde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TDE_0435
Messenger RNA biogenesis [BR:
tde03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TDE_0435
DNA repair and recombination proteins [BR:
tde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TDE_0435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
Helicase_C_2
ResIII
Motif
Other DBs
NCBI-ProteinID:
AAS10930
UniProt:
Q73QK8
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All DBs
Position
complement(489648..491351)
Genome browser
AA seq
567 aa
AA seq
DB search
MKNQNLQETDELYRWEDTPDDLYCPFVCETDNPEYSLEKTEDAVAVCAKNVFGIPSLYPW
QRLAIANILDAVHAVEARIEAEQTELKNKDGEDSDKEEKTKLLQKITSNTEDEKITSLYD
EDGIMRGRQIILLPTGAGKSLCFQVPALLLDGPTVIIYPLLALMSDQFRRMAEGGLEPVI
FKGGQTKEEREAQLARMEGSDGKPPAKLIIANPEVLSGGTLIDRIAACNVVHLAIDEAHC
VTEWGDSFRPAYLELTNIIKKLHPYAVSAFTATASPPVLQRIAEILFEGRAHLVRGESDR
TNIIYFVKHCRVKNPALLEEVQKRKRPMVIFCSSRKGTEQTASFLRLRLNDENIRFYHAG
LEREEKAETEKWFHEHKSGILICTCAWGMGVDKKDVKTVIHMDPSPTAEAYIQEAGRGGR
DGSIAEAVLLWSPADKKRIELLPEKQRLRAGVLKDFAESGKCRRAVLLKALGETRAEASN
PDEEVIACSGCDICNKTAVQYPEDEKLFIKLIKANKRIFTQNEAIDFFSSKKIFWEAGDV
KRLSAELLQEGLIKKLKTPLWKDKLSV
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcaaaatttacaagaaaccgatgagctgtaccgatgggaggatacgccggat
gacctttattgtccctttgtctgcgagaccgacaaccccgaatacagtttggaaaaaacc
gaagatgccgttgcagtttgtgcaaaaaacgttttcggtattccgtcgctctatccttgg
cagaggcttgcaatagccaatatcttagatgcggttcacgcagtggaagcccgcattgaa
gccgaacaaaccgaacttaaaaataaagacggggaagattcggacaaagaggaaaaaaca
aaattgctgcaaaaaattacctcaaacaccgaagatgaaaaaataacttcactttacgat
gaggacggaattatgcggggcaggcaaattattctcctgcctacaggagccggaaaatct
ttgtgctttcaagttccggcccttctgctggacgggcctacagtaatcatctatcccctc
ctagcccttatgagcgatcagtttaggcgaatggcggagggcggacttgagcctgtcatc
tttaagggcgggcaaactaaagaagaaagagaagcccagcttgcacgcatggaagggagc
gacggcaaacctcctgcaaagctcataattgcaaatcccgaagttctttcaggcggaact
cttatagataggattgcagcctgcaatgtggttcacttggcaatagacgaagcacactgc
gttaccgaatggggagacagttttagacctgcctatcttgagcttacaaacataatcaaa
aagcttcatccttatgcggtttcagcttttacggcaacagcgagtcctccggttttacaa
cgtatagccgaaattctttttgagggcagggctcatttggttcgaggcgaatcggataga
acaaatataatttattttgtaaagcattgcagggtaaaaaatcctgcccttcttgaagag
gtgcaaaaaagaaaaagacctatggtcattttttgttccagccggaaaggaacggaacag
acagcttcatttttgcggctccgtttaaatgatgaaaatataagattttatcatgcaggc
ctcgaaagagaagaaaaagccgaaacagaaaaatggttccatgaacataaaagcggtata
ctgatatgtacttgtgcctgggggatgggtgtcgataagaaggatgttaaaactgtaatt
cacatggatccttctcctactgccgaagcctatattcaagaagccggaagaggcgggcgg
gacgggagcattgccgaagcagttctgctatggtcgcctgccgataaaaaaaggatagag
cttttacccgaaaaacagcgtcttagggccggtgttcttaaagactttgccgaaagcgga
aagtgccgcagggcagttctattaaaggccctcggtgaaacaagggcagaagcttccaat
cccgacgaagaagtaatagcctgttcgggctgcgatatttgtaataaaacggctgttcaa
tatcccgaggacgaaaagctttttataaaacttataaaagcaaataaaagaatttttact
caaaatgaagctatcgattttttttcttcaaagaaaatattttgggaagctggggatgta
aagcgtttaagtgcagagctgcttcaagaggggcttatcaaaaaactgaaaacccctctt
tggaaggataagcttagtgtttag
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