Treponema denticola: TDE_0903
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Entry
TDE_0903 CDS
T00157
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tde
Treponema denticola
Pathway
tde03420
Nucleotide excision repair
tde03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TDE_0903 (pcrA)
03430 Mismatch repair
TDE_0903 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tde03400
]
TDE_0903 (pcrA)
Enzymes [BR:
tde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TDE_0903 (pcrA)
DNA repair and recombination proteins [BR:
tde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TDE_0903 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
TDE_0903 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
DEAD
AAA_12
AAA_11
YgfZ_barrel
ResIII
Motif
Other DBs
NCBI-ProteinID:
AAS11394
UniProt:
Q73P96
LinkDB
All DBs
Position
920368..922356
Genome browser
AA seq
662 aa
AA seq
DB search
MNEFTEGLNPEQFKAVTTINGPVLIIAGAGSGKTRVITFRIAHMLDKGIPQSQILALTFT
NKAAKEMADRVKELTGKKLQNLTVSTFHAFGVKVLRSHIDKIGWRSNFSIYDETDRNQLI
KECGRELKFSADALDVYKVGILFSNIKMGRKDWTNEHDSYKALYKEYQDGLKLYNAVDFD
DLIMLPIKIFKEHPEVLAEYRERYRYIMVDEFQDTSTQQYNFMKLIADKNICVVGDDDQS
IYSWRGASFENIRNFEKDFPEMIEIKLEQNYRSTGTILAAANGVISHNVNRKVKALWSEK
DSGRPIEIFIPENEAAEADFISDMILSLKQREGFKYSDFGVLIRANSLSRPLEESFLEVN
IPYRMSGGTSFFQRKEIKDLISYLRVVANPDDDVNLLRIINTPRRGIGKKTLETLSALAT
ENSCSMRTAIRLLLENPPEDMRGKSIEDLKEFAELISTHRTQLLSGKGLAQKVRKLLDDI
AYNEYLIAEYQKSEKAAQFKMMNIESFLHSMDDWENNPDNLDGSLYDYLNRITLLTRDDT
EEEKGEVNIMTIHSSKGLEFPVVFIAGAEDGLIPHARSVEENDGDVEEERRLFYVAITRA
QQKLFITSCRQRRKQGGITECAPSPFLDEIPADLVEYHEPDAQAEEERIADIFSQMKKKF
SM
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaatttactgaaggtcttaatcccgaacagtttaaagccgttactactattaac
gggccggtgcttataatagcgggagccggttcggggaaaacacgcgttatcacttttaga
attgcacacatgctcgacaagggaatccctcagtctcagattttggctcttacctttacc
aacaaggctgccaaggaaatggccgatcgggtaaaagagcttaccggtaaaaaacttcaa
aatctgactgtcagcacatttcacgcttttggagttaaggttctgcgttcccatatcgat
aaaataggctggagaagtaatttcagtatttatgacgaaaccgaccgcaatcagttaatt
aaagaatgcggaagagaacttaaattctcggcagatgccttggatgtttacaaggtaggc
attcttttttccaatatcaaaatgggaagaaaggattggacaaacgagcatgattcgtac
aaggctctttataaagaatatcaggatgggcttaaactttataatgcagtagactttgac
gaccttataatgcttcccataaaaatatttaaagaacatcccgaagtcttggcggagtac
cgcgaaagataccgatatataatggttgacgaatttcaggataccagcacacagcaatat
aattttatgaagctcatcgccgacaaaaatatctgtgtagtaggcgatgacgatcaatct
atttattcttggcggggtgccagttttgaaaatatccgcaactttgaaaaagactttccc
gaaatgatcgaaataaaacttgaacaaaactatcgttcaacagggacaattttggctgcc
gcaaacggtgtaatttctcataatgtaaaccgcaaggttaaagctctttggtcagaaaaa
gactcggggcgccccatcgaaatttttattcccgaaaacgaggcggcggaagccgatttt
atttcggacatgattttaagcttaaagcaaagagaaggttttaagtattccgacttcgga
gttttaatccgtgccaacagtttaagccgcccattggaagaatcctttttggaagtaaac
attccgtatagaatgtcgggggggacaagtttttttcagcggaaggaaataaaggacctt
ataagctatctgcgtgttgttgcaaaccccgacgatgatgtaaaccttctgcgcattatc
aacacgccgaggcgcggcataggcaaaaaaactcttgaaacactttccgctcttgcaacg
gaaaattcctgttcgatgcggactgcaatccgccttcttcttgaaaacccgcctgaagat
atgaggggaaaaagcatcgaagatttaaaagaatttgccgagcttataagcacacaccga
acccagcttctttctgggaagggccttgcccaaaaggttagaaaacttttggacgacatc
gcctataacgaataccttatcgccgaataccaaaaaagtgaaaaggctgctcaatttaaa
atgatgaatatcgaaagttttttgcactcgatggacgattgggaaaacaatcccgacaac
ttggacggaagtctctacgattatcttaaccgcattacccttttaacccgcgatgatact
gaagaagaaaaaggcgaagtaaatattatgaccattcattcttcaaagggcttggagttt
cctgtggtttttattgcgggagcggaagacggccttattccccatgcaaggagtgtcgaa
gaaaatgacggagatgtcgaagaagagcgccgccttttctatgtggctattaccagagcc
cagcaaaaactttttatcacaagctgcagacaaagacgaaagcagggcggcataaccgaa
tgtgctccgtctccttttttggatgagattcctgccgaccttgtcgaataccacgagccc
gatgcccaagccgaagaagaacgcatcgccgatatcttcagccaaatgaaaaaaaagttt
tcgatgtag
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