Treponema denticola: TDE_0979
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Entry
TDE_0979 CDS
T00157
Name
(GenBank) penicillin binding protein
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
tde
Treponema denticola
Pathway
tde00550
Peptidoglycan biosynthesis
tde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tde00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TDE_0979
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tde01002
]
TDE_0979
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tde01011
]
TDE_0979
Enzymes [BR:
tde01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
TDE_0979
Peptidases and inhibitors [BR:
tde01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
TDE_0979
Peptidoglycan biosynthesis and degradation proteins [BR:
tde01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
TDE_0979
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Peptidase_S13
Beta-lactamase2
PepSY_TM_like_2
Motif
Other DBs
NCBI-ProteinID:
AAS11470
UniProt:
Q73P20
LinkDB
All DBs
Position
complement(1002600..1004036)
Genome browser
AA seq
478 aa
AA seq
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MKHSTNGIIKFIFVLFGAVLFCVLSLAGFIFFHVSELKKAQPLEVSQEEKTAALKTFYSR
HKINKEFPPLNSIENFLPVKSSSSNIAPSAKKIELPKIDAESYILIHANTGTILAESNAD
KIIPPASLTKLVTIYTMLQKPQFKDLEKVVFPPEEAWAIFLPKGAAWMGLGENQSLSIEE
LIRGMAVCSGNDAALAAALLTEGSIEKFTLKMNEAVKTMGLKSTRFEDSSGLSEKNQTTA
RDFALFSLHYLKQYPENLKKFHSVNEISYPQKHNILIKKNSDGLKDFQIKPATNTLLKKI
EGCDGLKTGFIYESGFNISLTAQKNGERFIAVILGGHGKNFTEGIFKREQNSIKLMNFAF
DNFKSFDIREHNKIKRSVSVLSSNLNVKTSAFMPLLADEDFSQDYLTVFKNDERHIEQVI
ILPDVIRAPLFAGQQIGRIEYRIKDSDIVLKTIPLICPLDIKEGSSFRKFIDGFYRFF
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacagcacaaacggaattataaaatttatttttgttctctttggggctgtgctt
ttttgtgtattgagccttgcaggctttatttttttccatgtttcggaattaaaaaaagca
cagcctcttgaggtttcacaagaagaaaaaacggcagctcttaaaaccttttacagccgg
cataagattaacaaggagtttccgccccttaattccatagaaaattttttgcccgtaaaa
tcatcatcttctaacattgccccctcggcaaaaaaaatagaattacctaaaatagatgcc
gagtcctacattcttattcacgcaaacaccggtacaattttagccgaatccaatgccgat
aaaataatccctccggcctcccttacaaagctggtaacaatttataccatgcttcaaaag
cctcagtttaaagatttggaaaaggttgtttttccgcctgaggaggcttgggcaattttt
ctgccaaaaggagcggcatggatgggcttgggagaaaatcaaagtttaagtatagaagag
ctgataaggggaatggcggtttgctcggggaatgatgcagcccttgcggcggccctgctt
acggaaggaagtattgaaaagtttacgcttaaaatgaacgaggccgttaaaacgatgggc
ttaaaatccacccgctttgaagattcttcgggcttaagcgaaaaaaatcaaaccacggca
agggactttgccttattttccctccattatttaaaacaatatcccgaaaacttaaaaaag
tttcattcggtaaatgagataagctatccccaaaaacacaatattcttatcaaaaaaaac
tccgacggtttaaaggattttcaaattaagcctgccaccaataccctcctaaaaaaaata
gaaggctgtgacggtttaaaaacaggttttatttacgagtccggttttaatatttcgctt
acggctcaaaaaaacggagagcgttttattgcggtcatcctcggcggtcacggcaaaaac
tttaccgaaggaatttttaagcgggagcaaaattccataaagcttatgaattttgcattc
gacaattttaaaagttttgacataagggagcacaacaaaattaaaagaagtgtaagcgtt
ctaagttcaaacctaaatgtaaaaacttcagcctttatgcctctcctcgccgatgaggac
ttttcgcaagactatcttacggtttttaaaaacgatgagaggcatatagaacaagttata
attttacctgatgtaataagggcgcctctttttgcaggacagcaaatcggccgtatagaa
tatagaattaaagattcagacattgtgctaaaaaccattcctcttatctgtccgctcgat
ataaaagaaggttcatcttttagaaaatttatagacggcttttatcgatttttttaa
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