Treponema denticola: TDE_1104
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Entry
TDE_1104 CDS
T00157
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tde
Treponema denticola
Brite
KEGG Orthology (KO) [BR:
tde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tde03016
]
TDE_1104 (truB)
Enzymes [BR:
tde01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TDE_1104 (truB)
Transfer RNA biogenesis [BR:
tde03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TDE_1104 (truB)
Prokaryotic type
TDE_1104 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF5100
Motif
Other DBs
NCBI-ProteinID:
AAS11593
UniProt:
Q73NP8
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All DBs
Position
complement(1136803..1137876)
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AA seq
357 aa
AA seq
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MELNKNLIIPFAKQAGLTSFASMSAVKKALSTKKVGHTGTLDLFADGLLVLLTGQLTRLA
DIISAEKKTYEAWVEFGTETDTLDPEGEPVLTAPLPSYKNLTESIPSFLGKILQRPPEFS
AIKINGKRASDRIRSGEKIKIAEREIEIFKIELKGIITDSGLEFTEKDFTNINAELKIRY
AHIVVECSKGTYIRSLVRDLARKASSCAYVRALRRTAVGNFKLEDAAGFDLLNNFSAAPE
NLFLKEKKILDAAAGKKFYKQKEIDFLEIMAKSIIFSPKTAENLKLPYLFLDRKYLNDFY
NGKKIKFNWFLNTDEVLENITGLDLENKKTCVFCGDLWIGIIGLNKNCPKYETVIKN
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaataaaaaccttatcatcccgtttgcaaaacaggcgggacttacaagcttt
gcttcaatgtcggcggtaaaaaaagccctttctacaaaaaaggtcggccacactggaact
ctggatctttttgcagacggccttttggttcttcttacgggacaattaacccgacttgct
gacataatttcagccgaaaaaaagacctacgaagcatgggtagagttcggaacggaaacg
gataccctcgaccctgaaggcgaacccgttttaacagccccccttccctcttataaaaat
ttaacggaatccattccctcttttttaggaaaaatactccaaagaccgcccgaattttct
gcaataaaaataaacggaaaaagagcttccgacagaatacgcagcggcgaaaagataaaa
attgcagagagggaaatagaaatttttaaaatcgaacttaaagggataattacagatagc
ggtttggaatttacagaaaaggattttacaaacataaacgccgagctaaaaataagatat
gcccatatagtcgtggaatgttcaaagggaacatacatccgctcccttgtaagagacctt
gcaaggaaggcatcttcttgtgcctatgttagggccttgaggagaacggcagttggaaat
tttaaacttgaagatgcagcaggttttgatcttttaaataatttttctgcagcaccggaa
aatttattcttaaaagaaaagaaaattttagatgcagcggccggcaaaaaattctataaa
caaaaagaaattgattttttggaaataatggcaaaatctattattttttctcctaagacg
gcagaaaacttaaaattgccttacctctttttagatagaaaatatctaaacgatttttat
aacggaaagaagattaaattcaattggtttttaaataccgatgaagttttagaaaatatc
acaggcttagacctagaaaacaaaaaaacatgcgtcttttgcggtgacttgtggatcgga
attataggactaaataagaactgtccgaaatatgaaacggtgataaaaaattaa
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